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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 19:04:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:7393516-7393535
TGATATGTGGTAAAAGGACCACCACCAAAT7393516CCAAATACAGTACACGGAAGTTTAGAAAAGATGATTGATCACAAAAGTTG
Brassica napus genome assembly, chromosome: C04.
HG994368.1:7194633-7194652
TGATATGTGGTAAAAGGACCACCACCAAAT7194633CCAAATACAGTACACGGAAGTTTAGAAAAGATGATTGATCACAAAAGTTG
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:6890818-6890837
TGATATGTGGTAAAAGGACCACCACCAAAT6890818CCAAATACAGTACACGGAAGTTTAGAAAAGATGATTGATCACAAAAGTTG
Brassica oleracea var. viridis mRNA, clone: KALE-025A06, 3' end sequence.
DK524726.1:755-774
CAACTTTTGTGATCAATCATCTTTTCTAAA755CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. viridis mRNA, clone: KALE-066B18, 3' end sequence.
DK540414.1:677-696
CAACTTTTGTGATCAATCATCTTTTCTAAA677CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. viridis mRNA, clone: KALE-066K13, 3' end sequence.
DK540625.1:695-714
CAACTTTTGTGATCAATCATCTTTTCTAAA695CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. viridis mRNA, clone: KALE-080D23, 3' end sequence.
DK545819.1:662-681
CAACTTTTGTGATCAATCATCTTTTCTAAA662CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. viridis mRNA, clone: KALE-080N06, 3' end sequence.
DK546042.1:728-747
CAACTTTTGTGATCAATCATCTTTTCTAAA728CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. viridis mRNA, clone: KALE-096D03, 3' end sequence.
DK551922.1:708-727
CAACTTTTGTGATCAATCATTTTTTTTAAA708CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
BNQA_UP_124_G08_09NOV2005_052 Brassica napus BNQA Brassica napus cDNA 5', mRNA sequence.
EE554919.1:306-325
CAACTTTTGTGATCAATCATCTTTTCTAAA306CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
OL8947R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8947, mRNA sequence.
EH429079.1:552-571
CAACTTTTGTGATCAATCATCTTTTCTAAA552CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA
Brassica oleracea var. botrytis non-green plastid inner envelope membrane protein precursor (BOIMP8) mRNA, complete cds.
U13631.1:1146-1165
CAACTTTTGTGATCAATCATCTTTTCTAAA1146CTTCCGTGTACTGTATTTGGATTTGGTGGTGGTCCTTTTACCACATATCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAATACAGTACACGGAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAATACAGTACACGGAAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.223 | 0.215 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAATACAGTACACGGAAG&k=0&no_gap=0&offset=0&limit=50
0.838 | 0.614 | search_minus_done; http://172.18.8.135:50400/match?q=CTTCCGTGTACTGTATTTGG&k=0&no_gap=0&offset=0&limit=47
0.844 | 0.006 | cgi_end;

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