GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Mus musculus molossinus DNA, clone:MSMg01-421J10.T7, genomic survey sequence.
AG516179.1:180-199

CTTGGAACATCCAGTGAGTGTTATATACTG180CCAAATGCTTGAAACAAAGTGAAAGAGAGGAAGAGTGAGCTTCAGAGGTG

Inga oerstediana genome assembly, chromosome: 6.
OY723404.1:18773517-18773536

GAAAGACACTTGATTAATGATGGCATGATC18773517CCAAATGCTTGAAACAAAGTTTTTGAATGACTTGTTGGGGGCATCCATGA

Inga laurina genome assembly, chromosome: 5.
OY979705.1:18439414-18439433

GAAAGACACTTGATTAATGATGGCATGATC18439414CCAAATGCTTGAAACAAAGTTTTTGAATGACTGGTTGGGGGCATCCATGA

Inga laurina genome assembly, chromosome: 5.
OY979705.1:18617207-18617226

GAAAGACACTTGATTAATGATGGCATGATC18617207CCAAATGCTTGAAACAAAGTTTTTGAATGACTTGTTGGGGGCATCCATGA

Idaea aversata genome assembly, chromosome: 10.
OU026093.1:4236591-4236610

AAAGGAAAAGGTAGGAAAGTAATTTGAATC4236591CCAAATGCTTGAAACAAAGTTGAACAGAAATTCTGCAGAATTCTCATTAG

Achlya flavicornis genome assembly, chromosome: 4.
OX392470.1:13738762-13738781

TACGGTTCGTGAGCACTAACGTGGTACGGT13738762CCAAATGCTTGAAACAAAGTGCGCGAACATAGTTTGAACGAATAATACAT

Mouse DNA sequence from clone RP23-77I17 on chromosome 4.
AL772318.6:106817-106836

CACCTCTGAAGCTCACTCTTCCTGTCTTTC106817ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971568.1:90423785-90423804

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90423785ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971577.1:90029460-90029479

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90029460ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971597.1:89974148-89974167

CACCTCTGAAGCTCACTCTTCCTGTCTTTC89974148ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus domesticus genome assembly, chromosome: 4.
OW971626.1:89797977-89797996

CACCTCTGAAGCTCACTCTTCCTGTCTTTC89797977ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971639.1:89513647-89513666

CACCTCTGAAGCTCACTCTTCCTGTCTTTC89513647ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus molossinus genome assembly, chromosome: 4.
OW971661.1:90938854-90938873

CACCTCTGAAGCTCACTCTTCCTCTCTTTC90938854ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG

Mus spretus genome assembly, chromosome: 4.
OW971682.1:90730156-90730175

CACCTCTGAAGCTCACTCTTCCTCTCTTTC90730156ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG

Mus musculus genome assembly, chromosome: 4.
OW971712.1:88977344-88977363

CACCTCTGAAGCTCACTCTTCCTGTCTTTC88977344ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971723.1:90016517-90016536

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90016517ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971745.1:90566344-90566363

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90566344ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus musculus genome assembly, chromosome: 4.
OW971765.1:88682111-88682130

CACCTCTGAAGCTCACTCTTCCTCTCTTTC88682111ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTGGATGTTCCAAG

Mus musculus genome assembly, chromosome: 4.
OW971786.1:89473739-89473758

CACCTCTGAAGCTCACTCTTCCTGTCTTTC89473739ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971808.1:90831626-90831645

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90831626ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus castaneus genome assembly, chromosome: 4.
OW971838.1:89819411-89819430

CACCTCTGAAGCTCACTCTTCCTGTCTTTC89819411ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OW971856.1:90452889-90452908

CACCTCTGAAGCTCACTCTTCCTGTCTTTC90452889ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OX389798.1:99275660-99275679

CACCTCTGAAGCTCACTCTTCCTGTCTTTC99275660ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OX390147.1:94125553-94125572

CACCTCTGAAGCTCACTCTTCCTGTCTTTC94125553ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Mus musculus genome assembly, chromosome: 4.
OX439018.1:102544126-102544145

CACCTCTGAAGCTCACTCTTCCTGTCTTTC102544126ACTTTGTTTCAAGCATTTGGCAGTATATAACACTCACTAGATGTTCGAAG

Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:112170332-112170351

GTCCTCTGACACCCACTTCCCCCTTCTCTT112170332ACTTTGTTTCAAGCATTTGGCAATATAAAGTACTCACTGGCTGTTTGAAG

Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:102600781-102600800

GTCCTCTGACACCCACTTCCCCCTTCTCTT102600781ACTTTGTTTCAAGCATTTGGCAATATAAAGCACTCACTGGCTGTTTGAAG

Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:112132577-112132596

GTCCTCTGACACCCACTTCCCCCTTCTCTT112132577ACTTTGTTTCAAGCATTTGGCAATATAAAGCACTCACTGGCTGTTTGAAG

Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:114083802-114083821

GTCCTCTGACACCCACTTCCCCCTTCTCTT114083802ACTTTGTTTCAAGCATTTGGCAATATAAAGTACTCACTGGCTGTTTGAAG

Peromyscus eremicus genome assembly, chromosome: 2.
OX460467.1:109740094-109740113

AGACCCAGCCACTCACTTCCCTCCTCTCTT109740094ACTTTGTTTCAAGCATTTGGCAATATAAAGCCCTCACTGGCTGTTTGAAG

Cervus elaphus genome assembly, chromosome: 5.
OU343082.1:41888291-41888310

GGTAGACAACTTGACCCCTTCTTGGCTTGA41888291ACTTTGTTTCAAGCATTTGGAATTGGCACCAAAAAAATATAAAGTCTGCA

Muntiacus reevesi genome assembly, chromosome: 13.
OZ005637.1:42621340-42621359

GGTAGACAACTTGACCCCTTCTTGACTTGA42621340ACTTTGTTTCAAGCATTTGGAATTGGCACCAAAAAAATATAAAGTCTGCA

Acrocephalus scirpaceus scirpaceus genome assembly, chromosome: 3.
OU383775.1:57871758-57871777

TTAAGGTAATATATTTGTGAGGCCTTTGTT57871758ACTTTGTTTCAAGCATTTGGGTGGGATGAGCTCTTCCTACAGTGAGGTTA

Vipera ursinii genome assembly, chromosome: 13.
OX365978.1:2720058-2720077

AATAATAATAATAATAACATTAATAAAAAG2720058ACTTTGTTTCAAGCATTTGGGCAGCTGGCCCAGGATGTTTCAAAAGAATT

Inga oerstediana genome assembly, chromosome: 6.
OY723404.1:18649195-18649214

TCATGGATGCCCCCAACAAGTCATTCAAAA18649195ACTTTGTTTCAAGCATTTGGGATCATGCCATCATTAATCAAGTGTCTATC

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:6376730-6376749

CAATACAACGTTTCACTTCATTATGTCTTG6376730ACTTTGTTTCAAGCATTTGGTCATGAATAAATAAATGCATATTCACCAAC

Inga laurina genome assembly, chromosome: 5.
OY979705.1:18231611-18231630

TCATGGATGCCCCCAACAAGTCATTCAAAA18231611ACTTTGTTTCAAGCATTTGGGATCATGCCATCATTAATCAAGTGTCTATC

Idaea straminata genome assembly, chromosome: 11.
OX577856.1:10531536-10531555

CTAATGAAAATTCAGCAGAATTTCTGTTCA10531536ACTTTGTTTCAAGCATTTGGGATTCAAATTACTTTCCTACCTTTTCCTTT

Octopus vulgaris genome assembly, chromosome: 2.
OX597815.1:84845120-84845139

TACCATCCTTGGGTGCCTTTAGATAAGACT84845120ACTTTGTTTCAAGCATTTGGCCAGGTCTCTGATTTGAGGATAGCCTCCTA

Octopus vulgaris genome assembly, chromosome: 5.
OX597818.1:16195180-16195199

CTTCATTCTTGTCAGCCTTTAGTGGTGTCA16195180ACTTTGTTTCAAGCATTTGGGCAGAGTCATCTATCTGTAGATGACTTCTC

Maratus speciosus genome assembly, chromosome: 13.
OZ010800.1:10648592-10648611

TATATGATTAGTTCAGTTCACTTTTAAGAA10648592ACTTTGTTTCAAGCATTTGGGAAAAATGCTGCAGTCAGATTTTTCTATAA

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Debug Info:

0.009 | 0.009 | search_start;
0.123 | 0.115 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAATGCTTGAAACAAAGT&k=0&no_gap=0&offset=0&limit=50
0.174 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTTGTTTCAAGCATTTGG&k=0&no_gap=0&offset=0&limit=44
0.197 | 0.022 | cgi_end;

Summary:

Results:

Data Export:

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