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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-02-24 23:26:16, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Prunus armeniaca aberrant testa shape (ATS) gene, complete cds.
KP283472.1:913-932
TACCTTAACTTAGAGTTCACGCTTGGAAGG913CCAACTGCCGAATGGACTGTGCTCAATAGCCTCAACCTTCAAATGACTTA
Prunus incisa isolate 462-2010A aberrant testa shape (ATS) gene, complete cds.
KP283473.1:892-911
TACCTTAACTTAGAGTTCACGCTTGGAAGG892CCAACTGCCGAATGGACTGTGCTCAATAGCCTCAACCTTCAAATGACTTA
Prunus padus genome assembly, chromosome: 1.
OZ060511.1:12979617-12979636
TTCCTTAACTTAGAGTTCACGCTTGGAAGG12979617CCAACTGCCGAATGGACTGTGCTCAATAGCCTCAACCTTCAAATGACTTA
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:30373896-30373915
TAAGTCATTTGAAGGTTGAGGCTATTGAGC30373896ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus speciosa IZO01 DNA, chromosome 1, sequence.
AP029589.1:36472280-36472299
TAAGTCATTTGAAGGTTGAGGCTATTGAGC36472280ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus speciosa IZO01 DNA, chromosome 1.
AP038355.1:36328409-36328428
TAAGTCATTTGAAGGTTGAGGCTATTGAGC36328409ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus speciosa IZO01 DNA, chromosome 1.
AP038363.1:35439480-35439499
TAAGTCATTTGAAGGTTGAGGCTATTGAGC35439480ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus dulcis genome assembly, chromosome: 1.
OZ022197.1:36265069-36265088
TAAGTCATTTGAAGGTTGAGGCTATTGAGC36265069ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus dulcis genome assembly, chromosome: 1.
OZ022206.1:36162650-36162669
TAAGTCATTTGAAGGTTGAGGCTATTGAGC36162650ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus armeniaca genome assembly, chromosome: 1.
OZ046360.2:34245493-34245512
TAAGTCATTTGAAGGTTGAGGCTATTGAGC34245493ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus padus genome assembly, chromosome: 10.
OZ060520.1:9300434-9300453
TAAGTCATTTGAAGGTTGAGGCTATTGAGC9300434ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus armeniaca genome assembly, chromosome: 1.
OZ177837.1:33608834-33608853
TAAGTCATTTGAAGGTTGAGGCTATTGAGC33608834ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA
Prunus brigantina genome assembly, chromosome: 1.
OZ184542.1:36341526-36341545
TAAGTCATTTGAAGGTTGAGGCTATTGAGT36341526ACAGTCCATTCGGCAGTTGGCCTTCCAAGCGTGAACTCTAAGTTAAGGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAACTGCCGAATGGACTGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAACTGCCGAATGGACTGT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.119 | 0.109 | search_plus_done; http://172.18.8.135:50800/match?q=CCAACTGCCGAATGGACTGT&k=0&no_gap=0&offset=0&limit=50
0.151 | 0.032 | search_minus_done; http://172.18.8.135:50800/match?q=ACAGTCCATTCGGCAGTTGG&k=0&no_gap=0&offset=0&limit=47
0.158 | 0.007 | cgi_end;

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