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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:44:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x robusta genome assembly, chromosome: 10.
OY720334.1:2020319-2020340
AAGAAAACGTGTTTGGAAGGTGAGAATGTG2020319CCAAGAAAATTTAAGAAGAGGAGAGAGAGGAATGTAGTACTGTTAAGTTTCA
Humulus lupulus genome assembly, chromosome: 1.
OY720647.1:281072760-281072781
ATCAGTTCTGACTCCAATATTATTGTCTAC281072760CCAAGAAAATTTAAGAAGAGGAATACGAAACAATGAATAATCTAGCTCCCAT
Humulus lupulus genome assembly, chromosome: 3.
OY720649.1:131614153-131614174
GTCAGTTCTAACTCCATTATAGTTGCATAC131614153CCAAGAAAATTTAAGAAGAGGAATACGAAATAATGAATAATCTAGCTACCAT
Humulus lupulus genome assembly, chromosome: 8.
OY720655.1:129490334-129490355
GTCAGTTTTAACTCCAGTATTGTTGTTTAC129490334CCAAGAAAATTTAAGAAGAGGAATACGAAATAATGAATAATCTAGCTCTCAT
Crataegus laevigata genome assembly, chromosome: 10.
OY756947.1:13923989-13924010
AAGAAAATGTGTTTGGAAGGTGGGAATGTG13923989CCAAGAAAATTTAAGAAGAGGAGAGAGAAGAATGTAGTACCGTTAAGTTTCA
Humulus lupulus genome assembly, chromosome: 8.
OY720655.1:170211925-170211946
ATGGGAGCTAGATTATTCATTATTTCATAT170211925TCCTCTTCTTAAATTTTCTTGGGTAGACAACAATACTGGAGTTAAAAAATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAGAAAATTTAAGAAGAGGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAGAAAATTTAAGAAGAGGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.168 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAGAAAATTTAAGAAGAGGA&k=0&no_gap=0&offset=0&limit=50
0.268 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTCTTCTTAAATTTTCTTGG&k=0&no_gap=0&offset=0&limit=45
0.269 | 0.001 | cgi_end;

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