GGGenome | Results

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2025-04-06 11:41:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Arachis hypogaea DNA, clone: AHGS47E18.
DH961642.1:309-328

GGCCAGATGGAGCATATATGCAACTTAACT309CCAAGAAGCCACCAAGCTAAAGCTTTCCAAAGTCAATGTTGACATAATTT

Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:24831002-24831021

AAATTATGTCAACATTGACTTTGGAAAGCT24831002TTAGCTTGGTGGCTTCTTGGAGTTGAGTTGCATATATGCTCCATCTGGCC

Arachis ipaensis cultivar K30076 chromosome 07.
CP049898.1:25729726-25729745

AAATTATGTCAACATTGACTTTGGAAAGCT25729726TTAGCTTGGTGGCTTCTTGGAGTTGAGTTGCATATATGCTCCATCTGGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.132 | 0.123 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAGAAGCCACCAAGCTAA&k=0&no_gap=0&offset=0&limit=50
0.158 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TTAGCTTGGTGGCTTCTTGG&k=0&no_gap=0&offset=0&limit=49
0.160 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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