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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:07:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus chromosome 5 clone RP23-301J3 map 5, *** SEQUENCING IN PROGRESS ***, 12 unordered pieces.
AC163403.3:49330-49349
CTCACCCCACATTTGGTTTTAGAAGCAGTC49330CCAAGGAGACCCACGAATAACTGGACCTGCTGGACAGGTCAAAGGTATGC
Mus musculus chromosome 5, clone RP23-384P12, complete sequence.
AC161442.5:30082-30101
GCATACCTTTGACCTGTCCAGCAGGTCCAG30082TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971569.1:78871131-78871150
GCATACCTTTGACCTGTCCAGCAGGTCCAG78871131TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971578.1:78902976-78902995
GCATACCTTTGACCTGTCCAGCAGGTCCAG78902976TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971598.1:78328816-78328835
GCATACCTTTGACCTGTCCAGCAGGTCCAG78328816TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971642.1:78024811-78024830
GCATACCTTTGACCTGTCCAGCAGGTCCAG78024811TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus molossinus genome assembly, chromosome: 5.
OW971662.1:85224786-85224805
GCATACCTTTGACCTGTCCAGCAGGTCCAG85224786TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGGGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971713.1:77728587-77728606
GCATACCTTTGACCTGTCCAGCAGGTCCAG77728587TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971726.1:78975768-78975787
GCATACCTTTGACCTGTCCAGCAGGTCCAG78975768TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971746.1:78177943-78177962
GCATACCTTTGACCTGTCCAGCAGGTCCAG78177943TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus musculus genome assembly, chromosome: 5.
OW971768.1:77722656-77722675
GCATACCTTTGACCTGTCCAGCAGGTCCAG77722656TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGGGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971788.1:77780576-77780595
GCATACCTTTGACCTGTCCAGCAGGTCCAG77780576TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OW971809.1:80840792-80840811
GCATACCTTTGACCTGTCCAGCAGGTCCAG80840792TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus castaneus genome assembly, chromosome: 5.
OW971839.1:77726330-77726349
GCATACCTTTGACCTGTCCAGCAGGTCCAG77726330TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGGGGGATGAG
Mus musculus genome assembly, chromosome: 5.
OW971857.1:80097591-80097610
GCATACCTTTGACCTGTCCAGCAGGTCCAG80097591TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OX389799.1:90576713-90576732
GCATACCTTTGACCTGTCCAGCAGGTCCAG90576713TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGGGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OX390149.1:85530526-85530545
GCATACCTTTGACCTGTCCAGCAGGTCCAG85530526TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus genome assembly, chromosome: 5.
OX439019.1:84806520-84806539
GCATACCTTTGACCTGTCCAGCAGGTCCAG84806520TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG
Mus musculus chromosome 5 clone RP24-228G24 map 5, WORKING DRAFT SEQUENCE, 13 unordered pieces.
AC161491.1:7358-7377
GCATACCTTTGACCTGTCCAGCAGGTCCAG7358TTATTCGTGGGTCTCCTTGGGACTGCTTCTAAAACCAAATGTGGGGTGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAAGGAGACCCACGAATAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAGGAGACCCACGAATAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.161 | 0.153 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAGGAGACCCACGAATAA&k=0&no_gap=0&offset=0&limit=50
0.249 | 0.087 | search_minus_done; http://172.18.8.135:50400/match?q=TTATTCGTGGGTCTCCTTGG&k=0&no_gap=0&offset=0&limit=49
0.261 | 0.012 | cgi_end;

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