GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:17:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Onychomys torridus genome assembly, chromosome: 2.
LR877189.1:41616767-41616787
TGAATTTGTCCAGAGCTGTTTAAGAATATT41616767CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys arenicola genome assembly, chromosome: 2.
OX460348.1:41691775-41691795
TGAATTTGTCCAGAGCTGTTTAAGAATATT41691775CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys leucogaster genome assembly, chromosome: 2.
OX460372.1:41831231-41831251
TGAATTTGTCCAGAGCTGTATAAGAATATT41831231CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys leucogaster genome assembly, chromosome: 2.
OX460419.1:41343766-41343786
TGAATTTGTCCAGAGCTGTATAAGAATATT41343766CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys arenicola genome assembly, chromosome: 2.
OX460443.1:43220965-43220985
TGAATTTGTCCAGAGCTGTTTAAGAATATT43220965CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Onychomys torridus genome assembly, chromosome: 2.
OX460883.1:41616767-41616787
TGAATTTGTCCAGAGCTGTTTAAGAATATT41616767CCAAGTAAAGGGGTTTCCATCCAGACTCATGGAACACTGGAGAAATAGAGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:23685808-23685828
AATCAAAGCAACACCTTCTCTAGCATTCGT23685808CCAAGTAAAGGGGTTTCCATCAAACCCTAAGTCTACAAGGCAAGCAGCATC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:32218191-32218211
AAGCTCTCTTGCCTTGTAGACTTAGGGTTT32218191GATGGAAACCCCTTTACTTGGACGAATGCTAGAGAAGGTGTTGCTTTGATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAAGTAAAGGGGTTTCCATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAAGTAAAGGGGTTTCCATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.281 | 0.272 | search_plus_done; http://172.18.8.135:50400/match?q=CCAAGTAAAGGGGTTTCCATC&k=0&no_gap=0&offset=0&limit=50
0.332 | 0.052 | search_minus_done; http://172.18.8.135:50400/match?q=GATGGAAACCCCTTTACTTGG&k=0&no_gap=0&offset=0&limit=43
0.333 | 0.001 | cgi_end;

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