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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 05:14:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Orcinus orca genome assembly, chromosome: 14.
OW443374.1:44264015-44264034
CATCCGTGGTTACCCCAGCCCCAAAAGCCC44264015CCAATTCCACCAACATTTCCAAAATCCCCCGGAGCTGGGTACCTAACCCC
Argyrosomus regius genome assembly, chromosome: 8.
OX336889.1:20796906-20796925
CTTCAGTGATGGGCAGGGACTACCCCGATG20796906CCAATTCCACCAACATTTCCATCCCCTTAAAAAGCACACCATCTAATTTC
Fringilla coelebs genome assembly, chromosome: 25.
OY740749.1:5074402-5074421
AGAGCAAGGCCATAAATACATCACTGTCCT5074402CCAATTCCACCAACATTTCCATGTGCATGAACGCAAGGCAAGGAATAGGG
Solanum melongena mRNA, clone: AE504M13, 3'end, expressed in ovary at 5d post-anthesis.
FS006174.1:385-404
GTAAATCCAGCTCCACCACCAATTCCAGCA385CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: AE505P20, 3'end, expressed in ovary at 5d post-anthesis.
FS006862.1:378-397
GTAAATCCAGCTCCACCACCAATTCCAGCA378CCAATTCCACCAACATTTCCACCTATCCCGCTTACAACTCCACCAAATGG
Solanum melongena mRNA, clone: LS003N18, 3'end, expressed in ovary at anthesis.
FS019480.1:379-398
GTAAATCCAGCTCCACCACCAATTCCAGCA379CCAATTCCACCAACATTTCCACCTATCCCGCTTACGAC
Solanum melongena mRNA, clone: OVS03B10, 3'end, expressed in ovary at 5d pre-anthesis.
FS030868.1:388-407
GTAAATCCAGCTCCACCACCAATTCCAGCA388CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: OVS03P19, 3'end, expressed in ovary at 5d pre-anthesis.
FS031459.1:485-504
GTAAATCCAGCTCCACCACCAATTCCAGCA485CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: OVS05G23, 3'end, expressed in ovary at 5d pre-anthesis.
FS032303.1:391-410
GTAAATCCAGCTCCACCACCAATTCCAGCA391CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: OVS05N10, 3'end, expressed in ovary at 5d pre-anthesis.
FS032540.1:380-399
GTAAATCCAGCTCCACCACCAATTCCAGCA380CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: OVS06C17, 3'end, expressed in ovary at 5d pre-anthesis.
FS032748.1:391-410
GTAAATCCAGCTCCACCACCAATTCCAGCA391CCAATTCCACCAACATTTCCACCTATCCCGCTTAC
Solanum melongena mRNA, clone: OVS06I17, 3'end, expressed in ovary at 5d pre-anthesis.
FS032960.1:385-404
GTAAATCCAGCTCCACCACCAATTCCAGCA385CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: PLA02N18, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS043764.1:350-369
GTAAATCCAGCTCCACCACCAATTCCAGCA350CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: PLA06P16, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS046486.1:519-538
GTAAATCCAGCTCCACCACCAATTCCAGCA519CCAATTCCACCAACATTTCCACCTATCCCGCTTACG
Solanum melongena mRNA, clone: PLA08F07, 3'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS047333.1:351-370
GTAAATCCAGCTCCACCACCAATTCCAGCA351CCAATTCCACCAACATTTCCACCTATCCCGCTTACGACTCCACCAAATGG
Solanum melongena mRNA, clone: SHT06M14, 3'end, expressed in shoot at 7d after germination.
FS066417.1:397-416
GTAAATCCAGCTCCACCACCAATTCCAGCA397CCAATTCCACCAACATTTCCACCTATCCCGCTTACG
Buxus sempervirens genome assembly, chromosome: 5.
OX387186.1:17277489-17277508
GCTGAATTGTTTGATAAACTCTACAAGAGA17277489CCAATTCCACCAACATTTCCAGAACCCCTGAACATCTCAACCAACCAACT
Delphinus delphis genome assembly, chromosome: 16.
OX465342.1:46425196-46425215
GGGGTTAGGTACTCAGCTGCGGGGGATTTT46425196GGAAATGTTGGTGGAATTGGGGGCTTTTGGGGCTGGGGTAACCACGGATG
Globicephala melas genome assembly, chromosome: 16.
OY734055.1:46199984-46200003
GGGGTTAGGTACTCAGCTCCGGGGGATTTT46199984GGAAATGTTGGTGGAATTGGGGGCTTTTGGGGCTGGGGTAACCACGGATG
Sciaenops ocellatus chromosome 22.
CP136887.1:12953454-12953473
GAAATTAGATGGTGTGCTTTTTAAGGGGAT12953454GGAAATGTTGGTGGAATTGGCATCGGGGTAGTCCCTGCCCATCACTGAAG
Solanum melongena mRNA, clone: AE002A22, 5'end, expressed in ovary at anthesis.
FS000627.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: AE504M13, 5'end, expressed in ovary at 5d post-anthesis.
FS006173.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: AE505P20, 5'end, expressed in ovary at 5d post-anthesis.
FS006861.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: CHX04K04, 5'end, expressed in ovary at 24h after anthesis.
FS013739.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: CPA02M03, 5'end, expressed in ovary at 24h after anthesis.
FS015766.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: CPA03I17, 5'end, expressed in ovary at 24h after anthesis.
FS016237.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: LS003A24, 5'end, expressed in ovary at anthesis.
FS018953.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: LS003N18, 5'end, expressed in ovary at anthesis.
FS019479.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS03B10, 5'end, expressed in ovary at 5d pre-anthesis.
FS030867.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS03P19, 5'end, expressed in ovary at 5d pre-anthesis.
FS031458.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS05G23, 5'end, expressed in ovary at 5d pre-anthesis.
FS032302.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS05N10, 5'end, expressed in ovary at 5d pre-anthesis.
FS032539.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS06C17, 5'end, expressed in ovary at 5d pre-anthesis.
FS032747.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: OVS06I17, 5'end, expressed in ovary at 5d pre-anthesis.
FS032959.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: PLA02N18, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS043763.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: PLA06P16, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS046485.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: PLA07M05, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS046975.1:207-226
CCGTTTGGTGGAGTCGTAAGCGGGATAGGT207GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: PLA08F07, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS047332.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: SHT06M14, 5'end, expressed in shoot at 7d after germination.
FS066416.1:214-233
CCATTTGGTGGAGTCGTAAGCGGGATAGGT214GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Solanum melongena mRNA, clone: SHT07G23, 5'end, expressed in shoot at 7d after germination.
FS066756.1:217-236
CCATTTGGTGGAGTCGTAAGCGGGATAGGT217GGAAATGTTGGTGGAATTGGTGCTGGAATTGGTGGTGGAGCTGGATTTAC
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:43977149-43977168
CTTTTGGTGTAGTTGGAGTTTTAGACTCTA43977149GGAAATGTTGGTGGAATTGGTCCTTATTATCCCATAATGAAGGGAGAGGT
Crataegus laevigata genome assembly, chromosome: 2.
OY756939.1:17419973-17419992
CGTGGTGGAGCCACCGCAGCATAGGGGGAA17419973GGAAATGTTGGTGGAATTGGCGGACGAGATGAGGGCATTCGCGCAGCAGT
Neoneuromus ignobilis isolate Gutianshan chromosome 8.
CP092094.1:16909090-16909109
TTTAATTTAAATAATTTGTTTTTTAAGTAT16909090GGAAATGTTGGTGGAATTGGAGTACCTAAATCACAACTTAATTTCAGGTG
Coccinella septempunctata genome assembly, chromosome: 1.
OU015573.1:9119737-9119756
TAGCAATAGAGATGCTAGAAATCAGGCCTT9119737GGAAATGTTGGTGGAATTGGTGTTGGTGGAGATCCACGGACAAAAAAGCG
Molanna angustata genome assembly, chromosome: 19.
OY754983.1:13877685-13877704
CCAGGTTTCAGCTGCGTATAGAAATTATTG13877685GGAAATGTTGGTGGAATTGGAAGGACATAATCTTAATGACACATTTAATT

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