GGGenome | Results

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2025-04-09 15:23:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Larus fuscus genome assembly, chromosome: 23.
OZ010776.1:774554-774573

ACGTAACACCCCAGATCCGGCACCCAGCAC774554CCACAATCTTGTACCCAGCACTCCACACATGCCACCCGGCACCCCAGACC

EST00175 Sporophyte cDNA Library Pyropia haitanensis cDNA 5', mRNA sequence.
DN604964.1:105-124

CGTTGGTCACCCCGTGGTGCAGGTTGTGCA105CCACAATCTTGTACCCAGCATTGGCCTTGCTGCTGCTCGCCGCCGCCACC

Chroicocephalus ridibundus genome assembly, chromosome: 21.
OZ001754.1:4371340-4371359

GGTTTGGGGTGCCGGGTGGCATGCGTGGAG4371340TGCTGGGTACAAGATTGTGGGTGCTGGGTGCCGGATCTGGGGCGTTACGT

Neoitamus cyanurus genome assembly, chromosome: 7.
OX384546.1:26118088-26118107

TGTTACCGAAAGCTTCCAGCTATCGAAGGA26118088TGCTGGGTACAAGATTGTGGCCCATATGATGCCAGATCTGCCTAACGTTG

Dysmachus trigonus genome assembly, chromosome: 3.
OX454321.1:12966898-12966917

TGTTTGCGAAAGCTTCCAGCTGTCGAAGGA12966898TGCTGGGTACAAGATTGTGGCTCATATGATGCCTGATCTGCCTAACGTGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.152 | 0.143 | search_plus_done; http://172.18.8.135:50400/match?q=CCACAATCTTGTACCCAGCA&k=0&no_gap=0&offset=0&limit=50
0.182 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=TGCTGGGTACAAGATTGTGG&k=0&no_gap=0&offset=0&limit=48
0.184 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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