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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-15 14:06:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus spretus genome assembly, chromosome: 12.
OW971692.1:35378790-35378809
GTTTTCCCTCCGAAAACCCCCTATCCCCCC35378790CCACACACACCTCACTCACCAACCCACCCACACCCGCTTCCTGGCCCTGG
Felis catus Senzu DNA, chromosome: D3, American Shorthair breed.
AP023163.1:3806428-3806447
GCAGCAGGAGGCCCAACTACTTTCCTGGCC3806428CCACACACACCTCACTCACCCTCTGCACATGGCCGCCCCAGGTCACCACC
Myotis daubentonii genome assembly, chromosome: 5.
OY725364.1:43629353-43629372
TAAGTCTGGATTTTACCAATGACAACTGCA43629353CCACACACACCTCACTCACCTCCCGTACAGCTGCCAACTTCTCAACATTG
Lateolabrax maculatus linkage group 1 genomic sequence, sequence.
CP032584.1:10380577-10380596
AGTGCTCGGGTGCTGCTGGACTGTTCCCAT10380577CCACACACACCTCACTCACCTGTGTTGTTATACTGGGAGGAAGATAGGGA
Scyliorhinus canicula genome assembly, chromosome: 16.
LR744045.1:83538090-83538109
TATCCACACACACACACACACCTCACTCAT83538090CCACACACACCTCACTCACCCACACACACCTCACTCATCCACACACACCT
Sprattus sprattus genome assembly, chromosome: 9.
OY735293.1:3999278-3999297
ACACCTCACAAACCTCACACACCTCACTCA3999278CCACACACACCTCACTCACCACACACACCTCACAAACCTTACACACCTCA
Trifolium repens mRNA, clone: WCC28p21_048, unspecified EST.
FY464144.1:27-46
GTTTCTGTGCTCGCGTGCGAACTCAA27CCACACACACCTCACTCACCGGAAAAGCTTCGACCTCACCACCGGACGCC
Chrysoporthe puriensis isolate CMW54409 chromosome 2.
CP064903.1:3386859-3386878
GCCAGGCTGCACCGCACCGCGCTATCTCGA3386859CCACACACACCTCACTCACCCACTCACTCTCTCTCCCCCTCTCTCGGTCT
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:26951370-26951389
CTCTCTCTCTGCGCTCGCGTGCGAACTCAA26951370CCACACACACCTCACTCACCGGAAAAGCTTCGACCGCACCACCACCACCA
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:43233007-43233026
CTCTCTCTGTGTGCTCGCGTGCGAACTCAA43233007CCACACACACCTCACTCACCGGAAAAGCTTCGACCGCACCACCACCACCA
Thyatira batis genome assembly, chromosome: 1.
LR990486.1:8079533-8079552
AAAACTTCCCACATACTTAACACACATACA8079533CCACACACACCTCACTCACCACACACACCTCGCTCACCACACACACCTCA
Mesoligia furuncula genome assembly, chromosome: 22.
OU744812.1:1523843-1523862
TATAAAATTTGTAAAAAAATATTGCTGGTA1523843CCACACACACCTCACTCACCACCACACACCACACACCACCACCAAACCAC
Anisus vortex genome assembly, chromosome: 4.
OX421495.1:31356487-31356506
ACATACATACACACATACATATACACAGAC31356487CCACACACACCTCACTCACCCATACACACACAAAGACCTACACACACGCA
Cepaea hortensis genome assembly, chromosome: 3.
OY992878.1:3379434-3379453
CCTCGCCCCACCCACATACACCCCACCCAC3379434CCACACACACCTCACTCACCCACACATATCACCCACCCATACACACACAC
Cepaea hortensis genome assembly, chromosome: 7.
OY992882.1:107018272-107018291
CCCATCCACCCACATACAACCCCCACCCAC107018272CCACACACACCTCACTCACCCACACATATCACCCACCCATACACACACAC
Cepaea hortensis genome assembly, chromosome: 9.
OY992884.1:48856127-48856146
CAAACATTCCTGTCCACCCACTCACAACCC48856127CCACACACACCTCACTCACCCACGCATATCACTGTCACGGAATCGCTGAG
Cepaea hortensis genome assembly, chromosome: 17.
OY992892.1:91928525-91928544
CCGATCCACCCATATACAACCCCTACCAGC91928525CCACACACACCTCACTCACCCACACATATCACCCACCCATACACCCACAC
Cepaea hortensis genome assembly, chromosome: 19.
OY992894.1:30829319-30829338
CCCATCCACCAACATACAACCCCCACCCAC30829319CCACACACACCTCACTCACCCACACATATCACCCACCCATACACCCACAC
Mus spretus genome assembly, chromosome: 17.
OW971695.1:69412872-69412891
GTACGGGAATTCAGAGAGAGAGGAGAGAGA69412872GGTGAGTGAGGTGTGTGTGGGAGTTGTAGGGACAATCCTGGAACTTTGGT
Thunnus maccoyii genome assembly, chromosome: 9.
OU343199.1:14359839-14359858
CTCCCTTGTCCTCCTCCTGATCTAACAACA14359839GGTGAGTGAGGTGTGTGTGGAGCCAACAGTCCTCTGTAGCTCCGTTTCTC
Gobius niger genome assembly, chromosome: 13.
OX637607.1:17381578-17381597
CTTGCAAGTTCACGGTTGAAAGAGCTGAGC17381578GGTGAGTGAGGTGTGTGTGGACACGGTTTTAATGAGCTGTGACCGGGACC
HA_MX2_12e08_SP6 Lobster Multiple Tissues, Normalized Homarus americanus cDNA clone HA_MX2_12e08 5' similar to ref|XP_001603978.1| PREDICTED: similar to conserved hypothetical protein [Nasonia. Score
FC556217.1:277-296
ATAGGTAGGATAAATGATGAGCAGCAGAAT277GGTGAGTGAGGTGTGTGTGGTGAAAGACGGCCAAGACGTGTGCAAGATGA
Trifolium repens isolate ACLI19 chromosome 07_0cc.
CP125848.1:30506390-30506409
TGGTAGTGGTGGTGCGGTCGAAGCTTTTCC30506390GGTGAGTGAGGTGTGTGTGGTTGAGTTCGCATGCGAGCATAGAGAGAGAG
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:43624961-43624980
GAGTGGTGGTGGTGCGGTCGAAGCTTTTCC43624961GGTGAGTGAGGTGTGTGTGGTTGAGTTCGCACGCGAGCACAGAGAGAGAA
Leptosphaeria biglobosa brassicae b35_scaffold00018 complete sequence.
FO905646.1:651971-651990
AAATTTCACATGTGATAGAACAGCGTGTGC651971GGTGAGTGAGGTGTGTGTGGGTGATGGTATTTTAGTGGCATAGTATGGGG
Allium cepa genome assembly, chromosome: 1.
LR994629.1:23804235-23804254
TTGGATTGGTTATTGGTCGGGTGAGTAGGT23804235GGTGAGTGAGGTGTGTGTGGTTAGGTGGATTAGTAGAGGTGGTGTTGGTG
Calendula officinalis genome assembly, chromosome: 7.
OY970826.1:62718927-62718946
TATATATAGCGAAAGGGAGCAAGTAATTTT62718927GGTGAGTGAGGTGTGTGTGGATGGTAAGGTGGGCATGGGCCATGGCTGTC
Thyatira batis genome assembly, chromosome: 19.
LR990504.1:2990278-2990297
TGAGGTGTGTGTGGTGAGCGAGGTGTGTGT2990278GGTGAGTGAGGTGTGTGTGGTGTATGTGTGTTAAGTATGTGGGAAGTTTT
Melinaea menophilus n. ssp. AW-2005 genome assembly, chromosome: 9.
OU911046.1:18591126-18591145
GTGAGTGAGGTGTGTGTGTGTGTGTGTGGG18591126GGTGAGTGAGGTGTGTGTGGGTGGGTGAGGTGTGTGGGTGGGTGAGGTGT
Phorcus lineatus genome assembly, chromosome: 9.
OV121089.1:46407445-46407464
GGATTTTTCTACCCCTGTGTTACAGTACCC46407445GGTGAGTGAGGTGTGTGTGGGCCGTCTGATTGAGTACTTGATCAGTGCGC
Dasypolia templi genome assembly, chromosome: 6.
OY743142.1:16573453-16573472
AAGTAACCACTGAGATCTACGGAGGTTCTG16573453GGTGAGTGAGGTGTGTGTGGTGAATGTGACTTTTCTAGCCAGTAACATTT
Alviniconcha strummeri genome assembly, chromosome: 8.
OY757548.1:23078415-23078434
CTTTGTGGGATTTGTCTTTAAGTGTAACTG23078415GGTGAGTGAGGTGTGTGTGGTGAAGGCTTTGTGGGATGATTTGTCTTTAA
Cepaea hortensis genome assembly, chromosome: 1.
OY992876.1:64402948-64402967
GATTTGTGTGAGTGGGTGGGGTTATGTGTG64402948GGTGAGTGAGGTGTGTGTGGTTGGATGGGGGATGTGTCTCATAACATGGA
Cepaea hortensis genome assembly, chromosome: 2.
OY992877.1:106994720-106994739
TTGTGTGTGTATGGGTGGTTGATATCAGTG106994720GGTGAGTGAGGTGTGTGTGGGTGGGTGGTAGTGTATGTGGGTGGTAGAGG
Axinella damicornis genome assembly, chromosome: 14.
OZ007518.1:9881877-9881896
GTGTGTGTGGTTAGTGAGGTGTGTGTGTGT9881877GGTGAGTGAGGTGTGTGTGGGGAGTGTGTGTGTGTATGTGGTGAGTGTGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCACACACACCTCACTCACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACACACACCTCACTCACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.430 | 0.422 | search_plus_done; http://172.18.8.135:50400/match?q=CCACACACACCTCACTCACC&k=0&no_gap=0&offset=0&limit=50
0.700 | 0.270 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGAGTGAGGTGTGTGTGG&k=0&no_gap=0&offset=0&limit=32
0.711 | 0.011 | cgi_end;

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