GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 01:39:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sciurus carolinensis genome assembly, chromosome: 1.
LR738590.1:12528737-12528756
ACAGAAATTAGACAAGAGTCCCTTTGTGAT12528737TGAAGGGATGTCTTTCGTGGGAACGGGAGTCGGAGACAGACTTCTCTGAG
Trifolium pratense DNA, clone:RC0651r.ab1.
DE245810.1:413-432
CCTAATCACTTGACAGTGGTTACAGTGTTG413TGAAGGGATGTCTTTCGTGGCGGTGCCACAGGCCGCAATGGAGTGTTTAT
Trifolium repens isolate ACLI19 chromosome 08_0cc.
CP125850.1:24640656-24640675
GGAGCTATGAAGGTAGTGGTTACAGTGTTG24640656TGAAGGGATGTCTTTCGTGGCGGCGCCACAGGCCGCAATGGGGTGTTTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCACGAAAGACATCCCTTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACGAAAGACATCCCTTCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CCACGAAAGACATCCCTTCA&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.038 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGGGATGTCTTTCGTGG&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.002 | cgi_end;

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