GGGenome | Results

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2025-04-09 00:09:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:35023246-35023265

TGTGGACATAACATCTTCCACACATGTACA35023246ATTCATCTTGCGGTCCGTGGCCTCCATGCCTTATACCACCAGAATCTTCA

Daucus carota isolate Kuroda chromosome 4.
CP125304.1:22876057-22876076

TGTGGACATAACATCTTCCACACATGTACA22876057ATTCATCTTGCGGTCCGTGGCCTCCATGCCTTATACCACCAGAATCTTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=CCACGGACCGCAAGATGAAT&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCATCTTGCGGTCCGTGG&k=0&no_gap=0&offset=0&limit=50
0.131 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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