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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:39:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

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UCRCS03_05G22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05G22, mRNA sequence.
CF837912.1:117-136
CGGCAAATACAAGTTGCCTCCAATTTAAAC117CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAGGAAAA
UCRCS03_05I06_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05I06, mRNA sequence.
CF837966.1:118-137
CGGCAAATACAAGTTGCCTCCAATTTAAAC118CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAGGAAAA
UCRCS04_0005K21_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005K21, mRNA sequence.
CN184543.1:96-115
CGGCAAATACAAGTTGCCTCCAATTTAAAC96CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAGGAAAA
UCRCS08_0004L21_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0004L21, mRNA sequence.
CV714748.1:114-133
CGGCAAATACAAGTTGCCTCCAATTTAAAC114CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAAGGAAA
UCRCS04_2_019F11_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_019_T7_F11, mRNA sequence.
CV885734.1:115-134
CGGCAAATACAAGTTGCCTCCAATTTAAAC115CCACTCGCTAGACACAACCACATTCACTGATTTACAGGAAAAAAGGAAAA
UCRCS09_31D07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-31D07-H14-1-5.g, mRNA sequence.
CX050264.1:96-115
CGGCAAATACAAGTTGCCTCCAATTTAAAC96CCACTCGCTAGACACAACCACATTCACTGATTTACAGGAAAAAAGGAAAA
Citrus unshiu mRNA, clone: PCC0497, 5'-end sequence, expressed in callus.
DC895995.1:87-106
CGGCAAATACAAGTTGCCTCCAATTTAAAC87CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAGGAAAA
Citrus unshiu mRNA, clone: YJS0142, 5'-end sequence, expressed in juice sac.
DC900504.1:85-104
CGGCAAATACAAGTTGCCTCCAATTTAAAC85CCACTCGCTAGACACAACCACGTTCACTGATTTACAGGAAAAAAGGAAAA
USDA-FP_20234 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-44_A08 5', mRNA sequence.
DR912106.1:145-164
CGGCAAATACAAGTTGCCTCCAATTTAAAC145CCACTCGCTAGACACAACCACGTTCACTGATTTAC
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:11734692-11734711
CGGCAAATACAAGTTGCCTCCAATTTAAAC11734692CCACTCGCTAGACACAACCACATTCACTGATTTACAGGAAAAAAGGAAAA
Sequence 2343 from patent US 8937215.
HK372981.1:476-495
TTTTCCTTTTTTCCTGTAAATCAGTGAACG476TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Sequence 2343 from patent US 9574200.
KH565535.1:476-495
TTTTCCTTTTTTCCTGTAAATCAGTGAACG476TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Sequence 2343 from patent US 10227607.
MM772534.1:476-495
TTTTCCTTTTTTCCTGTAAATCAGTGAACG476TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Sequence 2343 from patent US 10883115.
MX198700.1:476-495
TTTTCCTTTTTTCCTGTAAATCAGTGAACG476TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Sequence 2343 from patent US 11530418.
OO987211.1:476-495
TTTTCCTTTTTTCCTGTAAATCAGTGAACG476TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
ALBEDO0001_IVaF_H02 Mature Albedo Citrus sinensis cDNA clone ALBEDO0001_IVaF_H02 5', mRNA sequence.
CB611039.1:479-498
TTTTCCTTTTTTCCTGTAAATCAGTGAACG479TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS02_04E06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04E06, mRNA sequence.
CF833789.1:441-460
TTTTCCTTTTTTCCTGTAAATCAGTGAATG441TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS03_05G22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05G22, mRNA sequence.
CF837913.1:459-478
TTTTCCTTTTTTCCTGTAAATCAGTGAACG459TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS03_05I06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05I06, mRNA sequence.
CF837967.1:459-478
TTTTCCTTTTTTCCTGTAAATCAGTGAACG459TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CGF1004540_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_F04 5', mRNA sequence.
CK934167.1:480-499
TTTTCCTTTTTTCCTGTAAATCAGTGAACG480TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS08_0004L21_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0004L21, mRNA sequence.
CV714747.1:392-411
TTTCCTTTTTTTCCTGTAAATCAGTGAACG392TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS04_2_019F11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_019_T3_F11, mRNA sequence.
CV885733.1:439-458
TTTTCCTTTTTTCCTGTAAATCAGTGAATG439TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCS09_31D07_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-31D07-H14-1-4.b, mRNA sequence.
CX050263.1:469-488
TTTTCCTTTTTTCCTGTAAATCAGTGAATG469TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
C02007F05SK IF1 Citrus clementina cDNA clone C02007F05, mRNA sequence.
CX288981.1:432-451
TTTTCCTTTTTTCCTGTAAATCAGTGAATG432TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGC
C05802E04SK FerrChloL1 Citrus clementina cDNA clone C05802E04, mRNA sequence.
CX296759.1:451-470
TTTTCCTTTTTTCCTGTAAACCAGTGAACG451TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Citrus nobilis x Citrus kinokuni mRNA, clone: EGJ_1890, 5'-end sequence, expressed in ovule.
DC887202.1:483-502
TTTTCCTTTTTTCCTGTAAATCAGTGAACG483TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Citrus unshiu mRNA, clone: FBI0378, 5'-end sequence, expressed in floral bud.
DC888334.1:389-408
TTTTCCTTTTTTCCTGTAAATCAGTGAACG389TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Citrus unshiu mRNA, clone: FBI0393, 5'-end sequence, expressed in floral bud.
DC888350.1:452-471
TTTTCCTTTTTTCCTGTAAATCAGTGAACG452TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Citrus sinensis mRNA, clone: VS28265, 5'-end sequence, expressed in seed.
DC900226.1:442-461
TTTTCCTTTTTTCCTGTAAATCAGTGAACG442TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
UCRCA01_06F23_r Bark of Madame Vinous Sweet Orange Scion on Standard Sour Orange Rootstock, Citrus Tristeza Virus Challenged - UCRCA01 Citrus aurantium cDNA clone CA_SEa0006F23, mRNA sequence.
DN625388.1:452-471
TTTTCCTTTTTTCCTGTAAATCAGTGAACG452TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
Volcani_7_01_A3 Volcani07 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
EX446528.1:368-387
TTTTCCTTTTTTCCTGTAAATCAGTGAACG368TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CS00-C1-650-021-A06-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY681347.1:480-499
TTTTCCTTTTTTCCTGTAAATCAGTGAACG480TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CS00-C3-700-076-G09-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY698870.1:456-475
TTTTCCTTTTTTCCTGTAAATCAGTGAATG456TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CS13-C1-001-005-D12-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
EY756169.1:265-284
TTTTCCTTTTTTCCTGTAAATCAGTGAATG265TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CS13-C1-001-014-C02-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
EY756839.1:265-284
TTTTCCTTTTTTCCTGTAAATCAGTGAATG265TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
KN0AAL2AG06FM1 KCl_Salt1 Citrus reshni cDNA clone KN0AAL2AG06, mRNA sequence.
FC919051.1:459-478
TTTTCCTTTTTTCCTGTAAATCAGTGAACG459TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG
CVSOVPOAN114 Library from post anthesis stages of ovules of polyembryonic Citrus sinensis Citrus sinensis cDNA, mRNA sequence.
HO046730.1:512-531
TTTCCTTTTTTTCCTGTAAATCAGTGAATG512TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGC
684 Valencia sweet orange callus library Citrus sinensis cDNA clone CS_2063 5', mRNA sequence.
HS086508.1:575-594
TTTTCCTTTTTTCCTGTAAATCAGTGAACG575TGGTTGTGTCTAGCGAGTGGGTTTAAATTGGAGGCAACTTGTATTTGCCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCACTCGCTAGACACAACCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTCGCTAGACACAACCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.487 | 0.478 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTCGCTAGACACAACCA&k=0&no_gap=0&offset=0&limit=50
2.036 | 1.550 | search_minus_done; http://172.18.8.135:50400/match?q=TGGTTGTGTCTAGCGAGTGG&k=0&no_gap=0&offset=0&limit=40
2.055 | 0.019 | cgi_end;

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