GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 14:39:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Galeopsis tetrahit genome assembly, chromosome: 6.
OY776124.1:9695942-9695961
AAAAGGGGTTCGAATCTTTGTATTCCTCTG9695942CCACTGTCACTACCACTTGCTTATCTTCATCAGCATCACTCACAATCTCA
Megachile leachella genome assembly, chromosome: 12.
OY756258.1:2668447-2668466
ATACTTAAATTCGTAATATTTGTTCCTAAA2668447CCACTGTCACTACCACTTGCATTTAATAATTGAAATAAACTATTTAAATT
Mobula hypostoma genome assembly, chromosome: 18.
OY992610.1:53124863-53124882
AAGCAAAAGATTTATAACTAATACTGTTAG53124863GCAAGTGGTAGTGACAGTGGTGATGACTGGTAATTTATTTTTGGACATGG
TSA: Cannabis sativa PK15972.1_1.CasaPuKu mRNA sequence.
JP449819.1:1028-1047
GATAAGGTCATTAGTAGCAATTCTACTATT1028GCAAGTGGTAGTGACAGTGGTGATAATTCAGAGGAGGGTTTGAAAAAAGA
Megachile willughbiella genome assembly, chromosome: 11.
OX243804.1:12991698-12991717
AATTTAAATAATTTATTTTAATTATTAAAT12991698GCAAGTGGTAGTGACAGTGGGTTATGAACAAATATGGCGCATTTAAGAAT
Metalampra italica genome assembly, chromosome: 26.
OX452996.1:138160-138179
GCGGTCGACTGTACACTACAGGGGCGATGT138160GCAAGTGGTAGTGACAGTGGGCTCGCGAGGACGTTTTGTACGTGTGTGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCACTGTCACTACCACTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTGTCACTACCACTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTGTCACTACCACTTGC&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGTGGTAGTGACAGTGG&k=0&no_gap=0&offset=0&limit=48
0.129 | 0.003 | cgi_end;

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