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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 14:44:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lutra lutra genome assembly, chromosome: 5.
LR738407.1:38753161-38753180
TTCTCTTTGTTCCTGCATATAATTTAGTTT38753161CCACTTCCACTGTGCTTCTGAGAAAAGGATACCGCAAGGTGGTGGGAGGA
Furcifer pardalis isolate Fpa_1 chromosome 2.
CP126891.1:178103173-178103192
CTGCCTTTTCTCTCTTTTCTTCTTTGTTTT178103173CCACTTCCACTGTGCTTCTGAATTCATGTTTATTCTCTGCCAGGGTGGGA
Echeneis naucrates genome assembly, chromosome: 5.
LR584046.1:16220361-16220380
CACAAGTAGCAATTCTACTACAAGCAGCAA16220361CCACTTCCACTGTGCTTCTGTTGCAACTCCAGTGTGTTGTGTGCTGTTGA
Podarcis lilfordi genome assembly, chromosome: 6.
OX395131.1:22534948-22534967
CTGCCTTTTCTCTCTTTTCTTCTTTGTTTT22534948CCACTTCCACTGTGCTTCTGAATTCATGTTTATTCTCTGCCAGGGTGGGA
Zootoca vivipara genome assembly, chromosome: 7.
OY735908.1:21765231-21765250
CTGCCTTTTCTCTCTTTTCTTCTTTGTTTT21765231CCACTTCCACTGTGCTTCTGAATTCATGTTTATTCTCTGCCAGGGTGGGA
CF0008375 Spruce Budworm Epidermis Library Choristoneura fumiferana cDNA clone CFEPr_02574 5' similar to PREDICTED similar to lethal (1) G0022 CG8231-PA, partial, mRNA sequence.
FC941181.1:348-367
CCGCGCAGGATGATGCCACCGGAGACGGCA348CCACTTCCACTGTGCTTCTGATCGGGGAGCTGTTGAAGCAGGCTGATATT
CF0065870 Spruce Budworm molting fifth-sixth larval instar library Choristoneura fumiferana cDNA clone SH17-B5 5' similar to chaperonin subunit 6a zeta, mRNA sequence.
FE271708.1:333-352
CCGCGCAGGATGATGCCACCGGAGACGGCA333CCACTTCCACTGTGCTTCTGATCGGGGAGCTGTTGAAGCAGGCTGATATT
TSA: Nannospalax galili isotig43403.Nagamubr mRNA sequence.
JL977523.1:1209-1228
AGCAGGAGATGGTGTCAAAGCATCATCGTC1209CCACTTCCACTGTGCTTCTGTGTGTTTTAAGGCAGATGTAATCCAAGGCA
Argyresthia albistria genome assembly, chromosome: 2.
OY735253.1:2762256-2762275
TGAACCGGTACACTTTAGTGGAGGGCCTCT2762256CCACTTCCACTGTGCTTCTGAATTTTGATGGCTTGAACACGAGATGCTGC
Meles meles genome assembly, chromosome: 3.
OV277443.1:145758493-145758512
TCTTCCCACCACCTTGTGGTATCCTTTTCT145758493CAGAAGCACAGTGGAAGTGGAAACTAAATTATACGCAGGAACAAAAAGAA
Podarcis cretensis genome assembly, chromosome: 6.
OX638154.1:76940495-76940514
TCCCACCCTGGCAGAGAATAAACATGAATT76940495CAGAAGCACAGTGGAAGTGGAAAACAAAGAAGAAAAGAGAGAAAAGGCAG
Lotus japonicus genomic DNA, chromosome 3, clone: LjT10E18, TM0035.
AP009649.1:83446-83465
AAGAAGAAGAAGAAGAAGAATCCGAAGCAA83446CAGAAGCACAGTGGAAGTGGGAGGGAATAAGAAGAATATATATGGATATT
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:22293251-22293270
AAGAAGAAGAAGAAGAAGAATCCGAAGCAA22293251CAGAAGCACAGTGGAAGTGGGAGGGAATAAGAAGAATATATATGGATATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCACTTCCACTGTGCTTCTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCACTTCCACTGTGCTTCTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.280 | 0.271 | search_plus_done; http://172.18.8.135:50400/match?q=CCACTTCCACTGTGCTTCTG&k=0&no_gap=0&offset=0&limit=50
0.321 | 0.042 | search_minus_done; http://172.18.8.135:50400/match?q=CAGAAGCACAGTGGAAGTGG&k=0&no_gap=0&offset=0&limit=41
0.324 | 0.003 | cgi_end;

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