GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:12:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Digitaria exilis genome assembly, chromosome: 3B.
LR994609.1:36896628-36896647
TGTAAGTCTAGTCTCAACATTCTTTCTTAT36896628CCAGAAAATTTGCGTCCAGTAATCTTCTCGGACTCGTACAGAATATGATT
EST683029 normalized cDNA library of onion Allium cepa cDNA clone ACAIC49, mRNA sequence.
CF446684.1:267-286
AATCATATTATTTATGAAGCAGAGAAGATG267ACTGGACGCAAATTTTCTGGCTAGAGTTGCAATAGTATTGGCATGCATCC
TSA: Allium cepa CUDHLF2_6420 mRNA sequence.
JR849238.1:435-454
AATCATATTATTTATGAAGCAGAGAAGATG435ACTGGACGCAAATTTTCTGGCTAGAGTTGCAATAGTATTGGCATGCATCC
Triticum aestivum genome assembly, chromosome: 7A.
LR877327.1:10452414-10452433
CACGTTTTGATGATGTTTAACAATTCGGGC10452414ACTGGACGCAAATTTTCTGGAAATTACAGCAAGATCAAATAACTATCATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGAAAATTTGCGTCCAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAAAATTTGCGTCCAGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGAAAATTTGCGTCCAGT&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=ACTGGACGCAAATTTTCTGG&k=0&no_gap=0&offset=0&limit=49
0.159 | 0.002 | cgi_end;

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