GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-25 22:32:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Apis cerana ACCB08193 mRNA sequence.
JR046972.1:771-790
TTAAATCAATCGCGAAGAGAATCGAAATCA771CCAGAAGAATCACCAGCCATCATTATTGCCTCTAGACCTCACTCATCCAC
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:27381003-27381022
TTAGGTTCTCCCAACCTTAGATCAACGTCT27381003CCAGAAGAATCACCAGCCATGTCTGAAGAATAAGAAGAAGAAGAAGAAGG
Sylvilagus floridanus genome assembly, chromosome: 6.
OX463228.1:15454961-15454980
ATCTGCTGATTCACTCCCCAGATGACCACA15454961ATGGCTGGTGATTCTTCTGGGTCTCTCACATGGGTGCAGGGGCCCAATCA
Vigna angularis mRNA, clone: VES10H08.
HX946031.1:80-99
CTTCCTTCTTCTTCTTCTTATTCTTCAGAC80ATGGCTGGTGATTCTTCTGGAGACGTTGATCTAAGGTTGGGAGAACCTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGAAGAATCACCAGCCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAAGAATCACCAGCCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.177 | 0.168 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGAAGAATCACCAGCCAT&k=0&no_gap=0&offset=0&limit=50
0.495 | 0.319 | search_minus_done; http://172.18.8.135:50400/match?q=ATGGCTGGTGATTCTTCTGG&k=0&no_gap=0&offset=0&limit=48
0.497 | 0.001 | cgi_end;

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