GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 14:12:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Elaeocarpus photiniifolius mRNA, contig: Ep_rep_c2616.
FX136511.1:59-80
AGAGCAAGAGTCAAACTTGAATATTGCACT59CCAGAATTCCATTGAAGATTGCTTACTGGAAATTGCCAAAGGGATTGGCGAT
Populus nigra genome assembly, chromosome: 12.
OX637683.1:610542-610563
AGAGCAAGAATCAAATTTGAACATCTCACT610542CCAGAATTCCATTGAAGATTGCTTACTTGAAATTGCTAAAGGAGTAAGTTTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGAATTCCATTGAAGATTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAATTCCATTGAAGATTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGAATTCCATTGAAGATTGC&k=0&no_gap=0&offset=0&limit=50
0.103 | 0.012 | search_minus_done; http://172.18.8.135:50400/match?q=GCAATCTTCAATGGAATTCTGG&k=0&no_gap=0&offset=0&limit=48
0.103 | 0.000 | cgi_end;

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