GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-15 15:17:25, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lutra lutra genome assembly, chromosome: 7.
LR738409.1:3164726-3164745
TTCAGGAGCTCCGTTTACACAATCTCTCCC3164726ACCATAAGCACCACCTCTGGGTTTTCATACTTTCTTTTCTTTAAAGTAAT
AdH1188-CPY2-A22TR AdH1 Arachis duranensis genomic clone AdH1188-CPY2-A22, genomic survey sequence.
FI316094.1:473-492
GAATTTATGGTGAGTTAATCGTGCCTAGCT473ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis hypogaea cultivar Shitouqi chromosome A01.
CP030983.1:85698168-85698187
GAATTTATGGTGAGTTAATCGTGCCTAGCT85698168ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis hypogaea cultivar Yunnan Rainbow Peanut chromosome 01.
CP156088.1:90541021-90541040
GAATTTATGGTGAGTTAATCGTGCCTAGCT90541021ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis hypogaea cultivar Huayu23 chromosome 01.
CP156108.1:89521106-89521125
GAATTTATGGTGAGTTAATCGTGCCTAGCT89521106ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis hypogaea cultivar Chedouzi chromosome 01.
CP156128.1:90901142-90901161
GAATTTATGGTGAGTTAATCGTGCCTAGCT90901142ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis hypogaea cultivar Laiyang Silihong chromosome 01.
CP156148.1:89214958-89214977
GAATTTATGGTGAGTTAATCGTGCCTAGCT89214958ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT
Arachis duranensis isolate Y26 chromosome 01.
CP160340.1:88973591-88973610
GAATTTATGGTGAGTTAATCGTGCCTAGCT88973591ACCATAAGCACCACCTCTGGACCTTATCTGCTCTGTAACAACCCTATGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGAGGTGGTGCTTATGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGAGGTGGTGCTTATGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.231 | 0.221 | search_plus_done; http://172.18.8.135:50800/match?q=CCAGAGGTGGTGCTTATGGT&k=0&no_gap=0&offset=0&limit=50
0.405 | 0.174 | search_minus_done; http://172.18.8.135:50800/match?q=ACCATAAGCACCACCTCTGG&k=0&no_gap=0&offset=0&limit=50
0.411 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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