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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:19:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Scyliorhinus canicula genome assembly, chromosome: 19.
LR744048.1:58749513-58749531
CCCTCATCAAGTCTGCCTCATTGCAAATCA58749513CCAGATCCACTATTTCTTCACCACAAACGGGATCACAGGGGAAGACAAG
Pm_0604 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869178.1:362-380
CCTCTCCCACAAGACCGACTTCATTCGCAC362CCAGATCCACTATTTCTTCCGATCCCACCCACCAACTCCTCAGCCCCAA
Prunus mume strain gojrou clone P09 SSR marker genomic sequence.
GU458010.1:1-19
1CCAGATCCACTATTTCTTCAACCCTAGAATGTCATCATCTTAGGAATGA
Prunus mume strain taihu 3 clone P10 SSR marker genomic sequence.
GU458011.1:1-19
1CCAGATCCACTATTTCTTCCGATCCCACCCACCAACTCCTCAGCCCCAA
Prunus americana strain kuhehonglian clone A29 SSR marker genomic sequence.
GU458030.1:1-19
1CCAGATCCACTATTTCTTCCGATCCTTCCACCAACTCCTCAGCCCCAAC
Prunus americana strain fangshanxiangbai clone A30 SSR marker genomic sequence.
GU458031.1:1-19
1CCAGATCCACTATTTCTTCCGATCCTGCCACCAACTCCTCAGCCCCAAC
Pseudognaphalium luteoalbum genome assembly, chromosome: 2.
OY730193.1:29179006-29179024
GTTCTGCCCGAAGGAGTAGTATAAGTTGAT29179006CCAGATCCACTATTTCTTCCAGCTATAAATGCAGTACTGGTAGATTGAT
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1644692732-1644692750
AAGTCATGTGACGTCTCTTTTACATGTGCA1644692732CCAGATCCACTATTTCTTCACAAGGAGGCTTAAGTTCATTGACTAACAA
Alisma plantago-aquatica genome assembly, chromosome: 3.
OY856411.1:1404186985-1404187003
AAGTCATGTGACGTCTCTTTTACATGTGCA1404186985CCAGATCCACTATTTCTTCACAAGGAGGCTTAAGTTCATTGACTAACAA
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:339375813-339375831
AAGTCATGTGATGTCTCTTTTACATGTGTA339375813CCAGATCCACTATTTCTTCACAAGGAGGCTTAAGTTCATTGACTAACAA
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:448498230-448498248
AAGTCATGTGACGTCTCTTTTACATGTGCA448498230CCAGATCCACTATTTCTTCACAAGGAGGCTTAAGTTCATTGACTAACAA
Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:272453207-272453225
ATTTCTGAAAATCTAACGAACTTCATTACA272453207CCAGATCCACTATTTCTTCCTTTCTTCCTCTTTTCAAATTTTCCTTTTC
Mamestra brassicae genome assembly, chromosome: 15.
LR991002.1:11834353-11834371
GTGAATGTACATCACAAAAACACTACAGAT11834353CCAGATCCACTATTTCTTCCTGTCATACACAACACCACTGAAGCATATA
Lepidonotus clava genome assembly, chromosome: 3.
OW387135.1:45810194-45810212
TCAGTTCGTATTGATTCTTCATCTGTCAAC45810194CCAGATCCACTATTTCTTCCCCGACTTCTGTAATTTTGAGTGGACCTGT
Onchidella celtica genome assembly, chromosome: 15.
OZ007581.1:21486247-21486265
TCTGTTGTTGGGCCATTTCTTTCTGAATTG21486247CCAGATCCACTATTTCTTCAAATTTTGTTCCTTCTGCTTTTAGCCGTCT
Cinclus cinclus genome assembly, chromosome: 3.
OY759679.1:86041746-86041764
GTGTCCCTAATGAGTAAATAACTTGCCTTT86041746GAAGAAATAGTGGATCTGGTTGCAGTGTTCTTAGCAGTTGCCTTCCATG
TSA: Capsicum annuum MGMT_Contig24254, mRNA sequence.
JW074498.1:1867-1885
GTACTCTCTAGAGGTTGCGACAGAGGATGT1867GAAGAAATAGTGGATCTGGGGTTACTGGATCTCACCATTGATGTATTCT
TSA: Capsicum annuum MGMT_Contig35331 mRNA sequence.
JW085575.1:1425-1443
GTACTCTCTAGAGGTTGCGACAGAGGATGT1425GAAGAAATAGTGGATCTGGGGTTACTGGATCTCACCATTGATGTATTCT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:127710222-127710240
TACTATTGTACAGGTTGCGACAGAGGATGT127710222GAAGAAATAGTGGATCTGGGGTTACTGGATCTCACCATTGATGTATTCT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:140269397-140269415
TACTATTGTACAGGTTGCGACAGAGGATGT140269397GAAGAAATAGTGGATCTGGGGTTACTGGATCTCACCATTGATGTATTCT
Allium cepa genome assembly, chromosome: 4.
LR994632.1:101433786-101433804
GATTGGATTCAAAAAGGTTTGAAATAGCAC101433786GAAGAAATAGTGGATCTGGATCCACTTTTAGCCCCTCTAACACTATGCT
Allium cepa genome assembly, chromosome: 6.
LR994634.1:246694674-246694692
GGCTTTACCAATCACCAGAGGGATATCGAT246694674GAAGAAATAGTGGATCTGGTATTGCTTGATCGCTTTTATTCATAGTCGG
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:497148776-497148794
TTATTAGTCAATGAACTTAAGCCTCCTTGT497148776GAAGAAATAGTGGATCTGGTGCACATGTAAAAGAGACGTCACATGACTT
Alisma plantago-aquatica genome assembly, chromosome: 7.
OY856415.1:655296626-655296644
TTGTTAGTCAATGAACTTAAGCCTCCTTGT655296626GAAGAAATAGTGGATCTGGTGCACATGTAAAAGAGATCACATGACTTTT
Gonocerus acuteangulatus genome assembly, chromosome: 3.
OX328125.1:20160724-20160742
ATAGGGGTAGCGGATGAAAAATATATTGAT20160724GAAGAAATAGTGGATCTGGTCAGAACAAATGGAAACATTCAGCCTATAT
Thelaira solivaga genome assembly, chromosome: 1.
OX377610.1:63852257-63852275
TTCTTCGAACAAGAAAAGGGTTCTAAACAC63852257GAAGAAATAGTGGATCTGGAGGAAAACTTGAACACAATAATAAAAAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGATCCACTATTTCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGATCCACTATTTCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.222 | 0.213 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGATCCACTATTTCTTC&k=0&no_gap=0&offset=0&limit=50
0.305 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGAAATAGTGGATCTGG&k=0&no_gap=0&offset=0&limit=35
0.313 | 0.007 | cgi_end;

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