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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-03-02 14:53:20, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

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Sequence 22706 from patent US 7750207.
GX328631.1:530-549
CACCATATCTGGTCCCCTCTCCCACCATCC530CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Sequence 22707 from patent US 7750207.
GX328632.1:1310-1329
CCACCATATCTGTCCCCTCTCCCACCATCC1310CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Sequence 22708 from patent US 7750207.
GX328633.1:478-497
CCACCATATCTGTCCCCTCTCCCACCATCC478CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Sequence 22709 from patent US 7750207.
GX328634.1:4899-4918
CCACCATATCTGTCCCCTCTCCCACCATCC4899CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Sequence 22710 from patent US 7750207.
GX328635.1:673-692
CCACCATATCTGTCCCCTCTCCCACCATCC673CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Sequence 3452 from patent US 8299321.
GZ585077.1:2634-2653
CCATATCTATCACCTCTACCACCACCATCT2634CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
605010D05.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence.
AI665368.2:419-438
CCACCATATCTGTCCCCTCTCCCACCATCC419CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
605092C05.x1 605 - Endosperm cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence.
AI833567.1:421-440
CCACCATATCTGTCCCCTCTCCCACCATCC421CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
606067B06.x1 606 - Ear tissue cDNA library from Schmidt lab Zea mays cDNA, mRNA sequence.
AI834365.1:359-378
CCACCATATCTGTCCCCTCTCCCACCATCC359CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
707104G07.x1 707 - Mixed adult tissues from Walbot lab (SK) Zea mays cDNA, mRNA sequence.
AW600661.1:373-392
CCACCATATCTGTCCCCTCTCCCACCATCC373CCAGATGGGCACTCTCTAGCGAAATGACCAGGTTTCCCACACTTGAAGNA
946010E04.X1 946 - tassel primordium prepared by Schmidt lab Zea mays cDNA, mRNA sequence.
BE186686.1:409-428
CCACCATATCTGTCCCCTCTCCCACCATCC409CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
MEST520-F05.univ ISUM6 Zea mays cDNA clone MEST520-F05 3', mRNA sequence.
BM380488.1:372-391
CCACCATATCTGTCCCCTCTCCCACCATCC372CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
3529_1_38_1_C08.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence.
CB380524.1:193-212
CCACCATATCTGTCCCCTCTCCCACCATCC193CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
3529_1_123_1_F11.x_1 3529 - 2 mm ear tissue from Schmidt and Hake labs Zea mays cDNA, mRNA sequence.
CD527878.1:387-406
CCACCATATCTGTCCCCTCTCCCACCATCC387CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
NACL--07-O17.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clone NACL--07-O17, mRNA sequence.
CF331690.1:433-452
CCATATCTATCACCTCTACCACCACCATCT433CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
zmrws05_0B20-010-c02.s1 zmrws05 Zea mays cDNA 3', mRNA sequence.
CF627353.1:455-474
CCACCATATCTGTCCCCTCTCCCACCATCC455CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
zmrww00_0B20-011-e09.s1 zmrww00 Zea mays cDNA 3', mRNA sequence.
CF637931.1:455-474
CCACCATATCTGTCCCCTCTCCCACCATCC455CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCAACACAAT
MEST1086_E11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRNA sequence.
DN219783.1:456-475
CCACCATATCTGTCCCCTCTCCCACCATCC456CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
ZM_BFb0122E22.f ZM_BFb Zea mays cDNA 3', mRNA sequence.
DT939779.1:652-671
CCACCATATCTGTCCCCTCTCCCACCATCC652CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTTCCACACTTGAAGCA
ZM_BFb0158K20.f ZM_BFb Zea mays cDNA 3', mRNA sequence.
DV163056.1:680-699
CCACCATATCTGTCCCCTCTCCCACCATCC680CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACT
1000096-H07.T7-1 UGI-Reseq Zea mays cDNA, mRNA sequence.
DV493579.1:358-377
CCACCATATCTGTCCCCTCTCCCACCATCC358CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
IV-1091-403C-F10.T7-1 UGIV-1091-Reseq Zea mays cDNA, mRNA sequence.
DV622344.1:440-459
CCACCATATCTGTCCCCTCTCCCACCATCC440CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
ZM_BFb0342B08.f ZM_BFb Zea mays cDNA 3', mRNA sequence.
DY539406.1:455-474
CCACCATATCTGTCCCCTCTCCCACCATCC455CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACAC
PUEJF05TD ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa264B10, genomic survey sequence.
CC445834.1:490-509
CCACCATATCTGTCCCCTCTCCCACCATCC490CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
PUJGP82TB ZM_0.6_1.0_KB Zea mays genomic clone ZMMBTa0663N20, genomic survey sequence.
CG112705.1:10-29
CCACCATCC10CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
ZMMBBb0644A21f ZMMBBb (HindIII) Zea mays subsp. mays genomic clone ZMMBBb0644A21 5', genomic survey sequence.
CL293049.1:537-556
CCACCATATCTGTCCCCTCTCTCATCATCC537CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Zea mays CL14723_1 mRNA sequence.
AY111102.1:448-467
CCACCATATCTCTGTCCCTCTCCCACCATC448CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
AP014959.1:35135536-35135555
CCATATCTATCACCTCTACCACCACCATCT35135536CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa indica subgroup Inn Ma Yebaw DNA, chromosome: 3.
AP027387.1:38167479-38167498
CCATATCTATCACCTCTACCACCACCATCT38167479CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
CP012611.1:37324034-37324053
CCATATCTATCACCTCTACCACCACCATCT37324034CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa Indica Group cultivar Shuhui498 chromosome 3, partial sequence.
CP018159.1:38190531-38190550
CCATATCTATCACCTCTACCACCACCATCT38190531CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa Indica Group cultivar Minghui 63 chromosome 3.
CP054678.1:38288880-38288899
CCATATCTATCACCTCTACCACCACCATCT38288880CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa Indica Group cultivar Zhenshan 97 chromosome 3.
CP056054.1:38009849-38009868
CCATATCTATCACCTCTACCACCACCATCT38009849CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza sativa Japonica Group cultivar Nipponbare isolate AGIS-1.0 chromosome 3.
CP132237.1:36108351-36108370
CCATATCTATCACCTCTACCACCACCATCT36108351CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Eragrostis tef cultivar Dabbi chromosome 2A.
CP137584.1:17683247-17683266
CCACCATATCTATCTCCTCTTCCACCATCC17683247CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTTCCACACTTGAAGCA
Eragrostis tef cultivar Dabbi chromosome 2B.
CP137585.1:15029263-15029282
CCACCATATCTATCTCCTCTCCCACCATCC15029263CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTTCCACACTTGAAGCA
Eragrostis tef cultivar Dabbi chromosome 4A.
CP137588.1:31414832-31414851
CCACCATATCTATCTCCTCTCCCACCATCC31414832CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTTCCACACTTGAAGCA
Eragrostis tef cultivar Dabbi chromosome 4B.
CP137589.1:28943782-28943801
CCACCATATCTATCTCCTCTCCCACCATCC28943782CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTAAAGCA
Oryza alta chromosome CC3.
CP140541.1:45602676-45602695
TATCTGTCACCTCTACCACCACCACCATCT45602676CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza alta chromosome DD3.
CP140542.1:37843513-37843532
CCATATCTGTCACCTCTACCACCACCATCT37843513CCAGATGGGCACTCTCTAGCAAAGTGACCAGGTTTTCCACACTTGTAGCA
Oryza sativa indica subgroup cultivar ZH8015 chromosome 03.
CP141110.1:38191535-38191554
CCATATCTATCACCTCTACCACCACCATCT38191535CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza longiglumis cultivar IRGC 106525 chromosome 3_HH.
CP143119.1:78078251-78078270
CCATATCTGTCACCTCTACCACCACCATCC78078251CCAGATGGGCACTCTCTAGCAAAGTGCCCAGGTTTTCCACACTTGTAGCA
Oryza longiglumis cultivar IRGC 106525 chromosome 3_JJ.
CP143120.1:45820386-45820405
CCATATCTGTCACCTCTACCACCACCATCC45820386CCAGATGGGCACTCTCTAGCAAAGTGCCCAGGTTTTCCACACTTGTAGCA
Paspalum notatum var. saurae isolate R1 chromosome 02.
CP144746.1:55784966-55784985
CCACCATATCTGTCCCCTCTCCCACCATCC55784966CCAGATGGGCACTCTCTAGCGAAATGACCAGGTTTGCCACACTTGAAGCA
Oryza rufipogon cultivar Y476 chromosome 3.
CP150376.1:39375682-39375701
CCATATCTATCACCTCTACCACCACCATCT39375682CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza rufipogon isolate Y476 chromosome 3.
CP154932.1:38799899-38799918
CCATATCTATCACCTCTACCACCACCATCT38799899CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza rufipogon isolate Y476 chromosome 3.
CP154944.1:39277023-39277042
CCATATCTATCACCTCTACCACCACCATCT39277023CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Oryza ridleyi isolate KAUST chromosome 3_HH.
CP161324.1:79812821-79812840
CCATATCTGTCACCTCTACCACCACCATCC79812821CCAGATGGGCACTCTCTAGCAAAGTGCCCAGGTTTTCCACACTTGTAGCA
Oryza ridleyi isolate KAUST chromosome 3_JJ.
CP161325.1:47793271-47793290
CCATATCTGTCACCTCTACCACCACCATCC47793271CCAGATGGGCACTCTCTAGCAAAGTGCCCAGGTTTTCCACACTTGTAGCA
Oryza sativa genome assembly, chromosome: 3.
OX637248.1:48952091-48952110
CCATATCTATCACCTCTACCACCACCATCT48952091CCAGATGGGCACTCTCTAGCAAAGTGGCCAGGTTTTCCACACTTGTAGCA
Phragmites australis genome assembly, chromosome: 3.
OY282614.1:49361473-49361492
CCACCATATCTGTCACCTCTACCGCCATCA49361473CCAGATGGGCACTCTCTAGCAAAATGACCAGGTTTCCCACACTTGAAGCA
Narthecium ossifragum genome assembly, chromosome: 7.
OY986969.1:26250726-26250745
CCACTATACCTATCACCTCTACCACCATCA26250726CCAGATGGGCACTCTCTAGCAAAATGCCCAGGCTTGCCACATTTGAAGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCAGATGGGCACTCTCTAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGATGGGCACTCTCTAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.962 | 0.953 | search_plus_done; http://172.18.8.135:50800/match?q=CCAGATGGGCACTCTCTAGC&k=0&no_gap=0&offset=0&limit=50
1.067 | 0.105 | search_minus_done; http://172.18.8.135:50800/match?q=GCTAGAGAGTGCCCATCTGG&k=0&no_gap=0&offset=0&limit=0
1.067 | 0.000 | cgi_end;

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