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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 09:27:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium subterraneum genome assembly, chromosome: 3.
OX637463.1:54390879-54390898
TTAACAGCAACATAATGTGAAATATTTCCA54390879CCAGCACTATCACCAGAAAGAAAAACATTTGATAAATCAGCATGTAGTAA
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:534708668-534708687
AATGCCAGACATGATAATGTCTTCAATGCT534708668CCAGCACTATCACCAGAAAGGAAACTTTACCCCTTAAAGGTGATAGCAAG
Brachypalpus laphriformis genome assembly, chromosome: 4.
OX246756.1:143704242-143704261
TGTTATATGGATGCAACACGTGGAGAGTGA143704242CCAGCACTATCACCAGAAAGCTGCAAACGTGCACTAGTAGGTGTCTACGC
Mobula hypostoma genome assembly, chromosome: X2.
OY992617.1:34589662-34589681
AAGACTCAGATTCAATCCTAATCTCTAGTG34589662CTTTCTGGTGATAGTGCTGGTACAGTTGTATGTTCTTTCTGTGACAGGAG
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:5304271-5304290
CTAGAACATGCTGATTTATCAAATGTTTTT5304271CTTTCTGGTGATAGTGCTGGTGGAAATATTTCACATTATGTTGCTGTTAA
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:5609230-5609249
CTACGACATGCTGATTTATCAAATGTTTTT5609230CTTTCTGGTGATAGTGCTGGTGGAAATATTTCACATTATGTTGCTGTTAA
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:3422257-3422276
CTTAAATATGCTGATTTATCAAATGTTTTT3422257CTTTCTGGTGATAGTGCTGGTGGTAACATTTCACATTATGTTGCTGTTAA
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:7403003-7403022
CTACGACATGCTGATTTATCAAATGTGTTT7403003CTTTCTGGTGATAGTGCTGGTGGAAATATTTCACATTATGTTGCTGTTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

GGGenome by @meso_cacase at DBCLS
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