GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 08:16:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Orcinus orca genome assembly, chromosome: 14.
OW443374.1:87987291-87987309
CAGCCGAGCACTGGACCGACCAATCGGAGT87987291CCAGGAAGTTTGTGGAGAGGTTTTGTTTGCTTAACTAGTGAGGTGTGCT
Hyperoodon ampullatus genome assembly, chromosome: 1.
OX457056.1:227318389-227318407
CAGCCGAGCACTGGACCGACTATTCGGAGT227318389CCAGGAAGTTTGTGGAGAGGTTTTGTTTGCTTAACTAGTGAGGTGTGCT
Lagenorhynchus albirostris genome assembly, chromosome: 16.
OX459088.1:81607911-81607929
CAGCCAAGCACTGGACCGACCAATCGGAGT81607911CCAGGAAGTTTGTGGAGAGGTTTTGTTTGCTTAACTAGTGAGGTGTGCT
Vespertilio murinus genome assembly, chromosome: 11.
OZ004715.1:37670063-37670081
CCACAATTTCAGACACCAGAGTCAGAAGAA37670063CCAGGAAGTTTGTGGAGAGAGAGAAAAAGGCAAAGACAAGCCAATCCAA
Caprimulgus europaeus genome assembly, chromosome: Z.
OU015527.1:81010219-81010237
GCTCAAGTGACACAACAAACACGTGGTTGC81010219CCAGGAAGTTTGTGGAGAGATCTCTGGAGATACTCAAAACCCATCTGGA
Osmerus eperlanus genome assembly, chromosome: 3.
OY830016.1:6003594-6003612
ATGGTGCTGACCCGTCTTATTAATGTGTTG6003594CCAGGAAGTTTGTGGAGAGGGAGATGTTTAAATCTGAGGAGGTGCCAGA
cbfsl25 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036505.1:366-384
AGGCCGGTGACAAGAGATGGTTCAAGGGAG366CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl77 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036557.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl184 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036664.1:181-199
AGGCCGGTGACGAGAGATGGTTCAAGGGAG181CCAGGAAGTTTGTGGAGAGCACTACCAACTCCTTCAATGTTGGGTAGAG
cbfsl204 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036684.1:171-189
AGGGCGGTGACAAGAGATGGTTCAAGGGAG171CCAGGAAGTTTGTGGAGAGCACTGACAACTCCTTCAATGTTGGGTAGAG
cbfsl245 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036725.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl247 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036727.1:169-187
AGGCCGGTGACAAGAGATGGTTCAAGGGAG169CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl264 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036744.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl268 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036748.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl333 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036813.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTACCAACTCCTTCAATGTTGCGTAGAG
cbfsl381 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036861.1:290-308
AGGCCGGTGACAAGAGATGGTTCAAGGGAG290CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
cbfsl414 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036894.1:381-399
AGGCCGGTGACAAGAGATGGTTCAAGGGAG381CCAGGAAGTTTGTGGAGAGCACTGCCAACTCCTTCAATGTTGCGTAGAG
Contig129 DEGdwarf cDNA library from oil palm spear leaves Elaeis guineensis cDNA clone Contig129, mRNA sequence.
JZ905631.1:426-444
AAGCTGGTGACAAGAGATGGTTCAAGGGTG426CCAGGAAGTTTGTGGAGAGCACAGCCAATTCCTTCAGCGTTGCATAAGA
Elaeis guineensis EST, clone (6lib)_isotig19903.
LM623739.1:980-998
AAGCTGGTGACAAGAGATGGTTCAAGGGTG980CCAGGAAGTTTGTGGAGAGCGCAGCCAATTCCTTCAACGTTGCATAAGA
TSA: Elaeis guineensis isotig03136.Elguifruit mRNA sequence.
JO090390.1:1112-1130
AAGCTGGTGACAAGAGATGGTTCAAGGGTG1112CCAGGAAGTTTGTGGAGAGCGCAGCCAATTCCTTCAACGTTGCATAAGA
TSA: Elaeis guineensis isotig03137.Elguifruit mRNA sequence.
JO090391.1:1109-1127
AAGCTGGTGACAAGAGATGGTTCAAGGGTG1109CCAGGAAGTTTGTGGAGAGCGCAGCCAATTCCTTCAACGTTGCATAAGA
Pyrrhosoma nymphula genome assembly, chromosome: 7.
OY754334.1:107671611-107671629
CTATTTTAGCGAAGAAATTGCAGACACAGT107671611CCAGGAAGTTTGTGGAGAGATAGACCAGATGAGACAGGAATAGGTAAGA
Sepioteuthis lessoniana genome assembly, chromosome: 23.
OY757926.1:39892345-39892363
TCCTTTCAAGACCGAGAAAGGTCACTGAAC39892345CCAGGAAGTTTGTGGAGAGCTTCATGGCACTCACGGGCGAACCTAGGCC
Aradus depressus genome assembly, chromosome: 3.
OY759216.1:16279932-16279950
ATCTGCGGGATTTTATCAGATTTCCCCCTC16279932CCAGGAAGTTTGTGGAGAGGGGAGGGGAGGGAGGTTTGTTGTCTTTAAT
Heterocephalus glaber genome assembly, chromosome: 10.
OX090918.1:15786609-15786627
CTAGCCCCACCCTCAGCCCTAGAGGCCATG15786609CTCTCCACAAACTTCCTGGTTGCAAGTGGGAGGCACGGTTGAGAAGGAG
Heterocephalus glaber genome assembly, chromosome: 10.
OX090950.1:42464048-42464066
CTAGCCCCACCCTCAGCCCTAGAGGCCATG42464048CTCTCCACAAACTTCCTGGTTGCAAGTGGGAGGCACGGTTGAGAAGGAG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001077.1:53816153-53816171
CTAGCCCCACCCTCAGCCCTAGAGGCCATG53816153CTCTCCACAAACTTCCTGGTTGCAAGTGGGAGGCACGGTTGAGAAGGAG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001120.1:53430110-53430128
CTAGCCCCACCCTCAGCCCTAGAGGCCATG53430110CTCTCCACAAACTTCCTGGTTGCAAGTGGGAGGCACGGTTGAGAAGGAG
Delphinus delphis genome assembly, chromosome: 16.
OX465342.1:2668625-2668643
AGCACACCTCACTAGTTAAGCAAACAAAAC2668625CTCTCCACAAACTTCCTGGACTCCGATTGGTCGGTCCAGTGCTCGGCTG
Balaenoptera acutorostrata genome assembly, chromosome: 16.
OX465366.1:2661624-2661642
AGCATACCTCACTAGTTAAGCAAACAAAAC2661624CTCTCCACAAACTTCCTGGACTCCGAATGGTCGGTCCAGTGCTCGGCTG
Stenella coeruleoalba genome assembly, chromosome: 16.
OX596401.1:2754738-2754756
AGCACACCTCACTAGTTAAGCAAACAAAAC2754738CTCTCCACAAACTTCCTGGACTCCGATTGGTCGGTCCAGTGCTCGGCTG
Myotis daubentonii genome assembly, chromosome: 14.
OY725373.1:19647447-19647465
CTTTGGATTAGCTTGTCATTGCCTTTTTGT19647447CTCTCCACAAACTTCCTGGTTCTTCTGACTCTGGTGTCTGAAGTTTTGG
Globicephala melas genome assembly, chromosome: 16.
OY734055.1:2502498-2502516
AGCACACCTCACTTGTTAAGCGAACAAAAC2502498CTCTCCACAAACTTCCTGGACTCCGATTGGTCGGTCCAGTGCTCGGCTG
Phocoena phocoena genome assembly, chromosome: 16.
OZ004773.1:2535396-2535414
AGCACACCTCACTAGTTAAGCAAACAAAAC2535396CTCTCCACAAACTTCCTGGACTCGGATTGGTCGGTCCAGTGCTCGGCTG
Vipera ursinii genome assembly, chromosome: 15.
OX365980.1:6425243-6425261
TCTGCTGAGAAATAAACTCTGCCAAACGGT6425243CTCTCCACAAACTTCCTGGCTTGTCTGGCTGACAAGAGGTTCTCCGGCT
OSIIEb15G05.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb15G05 3', mRNA sequence.
CB635234.1:222-240
CATCATGCCACGCTGAATGAGCTGGCTGCC222CTCTCCACAAACTTCCTGGCGCCCTTGAACCACCTCTTGTCGCCGGCCT
EG-A01_006_F05 Oil palm normal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599614.1:219-237
TCTTATGCAACGTTGAAGGAATTGGCTGCG219CTCTCCACAAACTTCCTGGCACCCTTGAACCATCTCTTGTCACCAGCTT
yfi01-3ms4-g06 Yfi01 Yucca filamentosa cDNA clone yfi01-3ms4-g06 5', mRNA sequence.
DT586015.1:171-189
CTCTATGCAACATTGAAGGAGCTGGCTGTG171CTCTCCACAAACTTCCTGGCTCCCTTGAACCATCTCTTGTCACCGGCTT
cbfsl366 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036846.1:72-90
CTCTACGCAACATTGAAGGAGTTGGCAGTG72CTCTCCACAAACTTCCTGGCTCCCTTGAACCATCTCTTGTCACCGGCCT
cbfsl371 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036851.1:72-90
CTCTACGCAACATTGAAGGAGTTGGCAGTG72CTCTCCACAAACTTCCTGGCTCCCTTGAACCATCTCTTGTCACCGGCCT
cbfsl375 Differentially expressed ESTs generated from leaves of Chlorophytum borivilianum Chlorophytum borivilianum cDNA, mRNA sequence.
JK036855.1:72-90
CTCTACGCAACATTGAAGGAGTTGGCAGTG72CTCTCCACAAACTTCCTGGCTCCCTTGAACCATCTCTTGTCACCGGCCT
Hermetia illucens genome assembly, chromosome: 2.
LR899010.1:72290881-72290899
TCTTCGCACCAGATTCTCTGGTACAAGCAC72290881CTCTCCACAAACTTCCTGGGACTCCATCGCAGTTTGGACAATCGGGTGA
Medioppia subpectinata.
OC854893.1:267-285
GCGATATTGTCATCCAATCCACTCAGTCGT267CTCTCCACAAACTTCCTGGCCTTATCATATTCTACGCCTCCTGCGATAA
Lineus longissimus genome assembly, chromosome: 5.
OU342996.1:22287719-22287737
TTCCAGCGCGAAGACTTCCTGCACCCGCAC22287719CTCTCCACAAACTTCCTGGCCTCACAATCTTCAAGACATGCCAGCTGCG
Lineus longissimus genome assembly, chromosome: 5.
OU342996.1:22298932-22298950
TTCCAGCGCGAAGACTTCCTGCACCCGCAC22298932CTCTCCACAAACTTCCTGGCCTCACAATCTTCAAGACATGCCAGCTGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGGAAGTTTGTGGAGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGGAAGTTTGTGGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.535 | 1.527 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGGAAGTTTGTGGAGAG&k=0&no_gap=0&offset=0&limit=50
2.199 | 0.663 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCCACAAACTTCCTGG&k=0&no_gap=0&offset=0&limit=26
2.212 | 0.014 | cgi_end;

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