GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 12:58:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:38994389-38994408
CTTTCACTGAGGGGGAAGATGCAGCATCAG38994389CCAGGGTGGTGAATGACTTTGACTTGCCATTATAAAACTTTGAGATGCTT
Danio kyathit genome assembly, chromosome: 16.
LR812534.1:71163726-71163745
GGAAAACAAACTCCCGAGTGTGTACTTTAT71163726AAAGTCATTCACCACCCTGGCTACGCTGTTTCACTATCTTAAAATGAAAA
Vigna angularis mRNA, clone: VES02L16.
HX943116.1:333-352
AAGCATCTCAAAGTTTTATAATGGCAAGTC333AAAGTCATTCACCACCCTGGCTGATGCTGCATCTTCCCCCTCAGTGAAAG
Vigna angularis mRNA, clone: VES06P24.
HX944722.1:329-348
AAGCATCTCAAAGTTTTATAATGGCAAGTC329AAAGTCATTCACCACCCTGGCTGATGCTGCATCTTCCCCCTCAGTGAAAG
Vigna angularis mRNA, clone: VES15O18.
HX948090.1:338-357
AAGCATCTCAAAGTTTTATAATGGCAAGTC338AAAGTCATTCACCACCCTGGCTGATGCTGCATCTTCCCCCTCAGTGAAAG
Vigna angularis mRNA, clone: VES20A22.
HX949643.1:366-385
AAGCATCTCAAAGTTTTATAATGGCAAGTC366AAAGTCATTCACCACCCTGGCTGATGCTGCATCTTCCCCCTCAGTGAAAG
Vigna angularis mRNA, clone: VES21D03.
HX950071.1:335-354
AAGCATCTCAAAGTTTTATAATGGCAAGTC335AAAGTCATTCACCACCCTGGCTGATGCTGCATCTTCCCCCTCAGTGAAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGGGTGGTGAATGACTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGGGTGGTGAATGACTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.092 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGGGTGGTGAATGACTTT&k=0&no_gap=0&offset=0&limit=50
0.523 | 0.431 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGTCATTCACCACCCTGG&k=0&no_gap=0&offset=0&limit=49
0.527 | 0.004 | cgi_end;

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