GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:21:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 15 from Patent WO2012088289.
JA817678.1:375-394
CGGGCAAGGCGTCTGGGCCATTAGTAATAT375CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Sequence 15 from patent US 9702013.
KH919205.1:375-394
CGGGCAAGGCGTCTGGGCCATTAGTAATAT375CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Sequence 15 from patent US 10590490.
MO959482.1:375-394
CGGGCAAGGCGTCTGGGCCATTAGTAATAT375CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:58369858-58369877
CGGGCAAGGCGTCTGGGCCATTAGTAATAT58369858CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Brassica napus genome assembly, chromosome: A09.
HG994363.1:42252688-42252707
CGGGCAAGGCGTCTGGGCCATTAGTAATAT42252688CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Brassica rapa genome, scaffold: A09.
LR031568.1:46586505-46586524
CGGGCAAGGCGTCTGGGCCATTAGTAATAT46586505CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Brassica rapa genome assembly, chromosome: A09.
LS974625.2:57053184-57053203
CGGGCAAGGCGTCTGGGCCATTAGTAATAT57053184CCAGTGGCCAATACGAAACCCATCTCATTAATATCAAATCTCCAATGAAA
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB023B16, complete sequence.
AC189269.2:86007-86026
TTTCATTGGAGATTTGATATTAATGAGATG86007GGTTTCGTATTGGCCACTGGATATTACTAATGGCCCAGACGCCTTGCCCG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB087M20, complete sequence.
AC189502.2:13278-13297
TTTCATTGGAGATTTGATATTAATGAGATG13278GGTTTCGTATTGGCCACTGGATATTACTAATGGCCCAGACGCCTTGCCCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGTGGCCAATACGAAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGTGGCCAATACGAAACC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.272 | 0.264 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGTGGCCAATACGAAACC&k=0&no_gap=0&offset=0&limit=50
0.292 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTTCGTATTGGCCACTGG&k=0&no_gap=0&offset=0&limit=43
0.294 | 0.001 | cgi_end;

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