GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 11:07:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Populus nigra mRNA, clone: PnFL2-067_G12, 5'end.
DB886675.1:300-318
CTATCTCAGATCTGCAGGCTCAAACCTGTT300CCAGTTTTTCGTTGTGGCAAATCTGAGGACACTTTTAGAGCATTTTATT
Miltochrista miniata genome assembly, chromosome: 3.
OW121750.1:19616656-19616674
AAAAAGACTTAATGTCGTTTTCCCGAAATT19616656CCAGTTTTTCGTTGTGGCACGTTGTAGTTTTAAATGAGCGAATTATGTT
Miltochrista miniata genome assembly, chromosome: 7.
OW121754.1:5870861-5870879
AAAAAGTCTCAATGTCGTTTTCCCAAAATT5870861CCAGTTTTTCGTTGTGGCACGTTGTAGTTTTAAATGAGCGATATAATAC
Miltochrista miniata genome assembly, chromosome: 29.
OW121776.1:15457050-15457068
AAAAAGTCTCAATGTCGTTTTCCCAAAATT15457050CCAGTTTTTCGTTGTGGCACGTTGTAGTTTTAAATGAGCGATGTTATCT
Populus nigra genome assembly, chromosome: 15.
OX637686.1:4884707-4884725
AATAAAATGCTCTAAAAGTGTCCTCAGATT4884707TGCCACAACGAAAAACTGGAACCGGTTTGAGCCTGCAGATCTGAGATAG
Miltochrista miniata genome assembly, chromosome: 11.
OW121758.1:12216895-12216913
TGTGTACATCGCTCATTTAAAACTACAACG12216895TGCCACAACGAAAAACTGGAATTTTGGGAAAACGACATTGAGACTTTTT
Sarcophaga carnaria genome assembly, chromosome: 1.
OY283149.1:98274814-98274832
AAGGTCAATTAATGTTAATGCCGTGTTAAG98274814TGCCACAACGAAAAACTGGATTTTTTAAATCGATTTAATTAACTTGTAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCAGTTTTTCGTTGTGGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCAGTTTTTCGTTGTGGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.135 | 0.126 | search_plus_done; http://172.18.8.135:50400/match?q=CCAGTTTTTCGTTGTGGCA&k=0&no_gap=0&offset=0&limit=50
0.152 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TGCCACAACGAAAAACTGG&k=0&no_gap=0&offset=0&limit=46
0.154 | 0.002 | cgi_end;

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