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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:29:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Raja brachyura genome assembly, chromosome: 18.
OY740798.1:21336613-21336631
TTCAAACTTTCCTCTTTGGTCTCACTCAGG21336613CCATCACCGAACCACCAGCGCAGCGGGACAGCTGCTTTGAGATTCCCCA
Trifolium repens mRNA, clone: WCC05e10_051, unspecified EST.
FY455804.1:70-88
TTGTCGTTGTGGAACCTGTTCCCGAACCAA70CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC07g18_091, unspecified EST.
FY456557.1:95-113
TTGTTGTTGTGGAACCTGTTCCCGAACCAA95CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC07j15_038, unspecified EST.
FY456620.1:92-110
TTGTTGTTGTGGAACCTGTTCCCGAACCAA92CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAAGCCGAAGC
Trifolium repens mRNA, clone: WCC10n09_040, unspecified EST.
FY457770.1:94-112
TTGTCGTTGTGGAACCTGTTCCCGAACCAA94CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC10n13_008, unspecified EST.
FY457774.1:108-126
TTGTCGTTGTGGAACCTGTTCCCGAACCAA108CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC10o06_095, unspecified EST.
FY457790.1:98-116
TTGTCGTTGTGGAACCTGTTCCCGAACCAA98CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC11o20_031, unspecified EST.
FY458141.1:89-107
TTGTTGTTGTGGAACCTGTTCCCGAACCAA89CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC12c23_073, unspecified EST.
FY458233.1:77-95
TTGTTGTTGTGGAACCTGTTCCCGAACCAA77CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC13d06_090, unspecified EST.
FY458580.1:123-141
TTGTCGTTGTGGAACCTGTTCCCGAACCAA123CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC13i15_037, unspecified EST.
FY458691.1:98-116
TTGTCGTTGTGGAACCTGTTCCCGAACCAA98CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC15i11_069, unspecified EST.
FY459384.1:116-134
CTGTTGTTGTGGAACCTGTTCCCGAACCAA116CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC16f08_020, unspecified EST.
FY459667.1:92-110
TTGTTGTTGTGGAACCTGTTCCCGAACCAA92CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC17o14_031, unspecified EST.
FY460209.1:118-136
TTGTTGTTGTGGAACCTGTTCCCGAACCAA118CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC18k05_077, unspecified EST.
FY460468.1:108-126
TTGTTGTTGTGGAACCTGTTCCCGAACCAA108CCATCACCGAACCACCAGCCTCGGAGAAAGCAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC20b03, unspecified EST.
FY460983.1:63-81
TTGTCGTTGTGGAACCTGTTCCCGAACCAA63CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC20f16, unspecified EST.
FY461082.1:93-111
TTGTTGTTGTGGAACCTGTTCCCGAACCAA93CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC22l15_046, unspecified EST.
FY461912.1:92-110
TTGTTGTTGTGGAACCTGTTCCCGAACCAA92CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAAGCCGAAGC
Trifolium repens mRNA, clone: WCC23c15_041, unspecified EST.
FY462072.1:94-112
TTGTCGTTGTGGAACCTGTTCCCGAACCAA94CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC23l23_078, unspecified EST.
FY462279.1:124-142
TTGTTGTTGTGGAACCTGTTCCCGAACCAA124CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC24n14_024, unspecified EST.
FY462678.1:90-108
TTGTTGTTGTGGAACCTGTTCCCGAACCAA90CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC27m01_007, unspecified EST.
FY463707.1:101-119
TTGTCGTTGTGGAACCTGTTCCCGAACCAA101CCATCACCGAACCACCAGCCTCGGAGAAAGA
Trifolium repens mRNA, clone: WCC28j12_086, unspecified EST.
FY464004.1:103-121
TTGTCGTTGTGGAACCTGTTCCCGAACCAA103CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC30e22, unspecified EST.
FY464609.1:77-95
TTGTTGTTGTGGAACCTGTTCCCGAACCAA77CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC33l18_094, unspecified EST.
FY465840.1:115-133
TTGTCGTTGTGGAACCTGTTCCCGAACCAA115CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC33p13_016, unspecified EST.
FY465927.1:108-126
TTGTTGTTGTGGAACCTGTTCCCGAACCAA108CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAAGCCGAAGC
Trifolium repens mRNA, clone: WCC34f18_084, unspecified EST.
FY466064.1:82-100
TTGTTGTTGTGGAACCTGTTCCCGAACCAA82CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC36p18, unspecified EST.
FY467003.1:61-79
TTGTTGTTGTGGAACCTGTTCCCGAACCAA61CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGGCCGAAGC
Trifolium repens mRNA, clone: WCC39l10_062, unspecified EST.
FY467994.1:98-116
TTGTCGTTGTGGAACCTGTTCCCGAACCAA98CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC42f13_004, unspecified EST.
FY468935.1:110-128
TTGTCGTTGTGGAACCTGTTCCCGAACCAA110CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Trifolium repens mRNA, clone: WCC43p13_016, unspecified EST.
FY469522.1:94-112
TTGTCGTTGTGGAACCTGTTCCCGAACCAA94CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
EG_Bb021M10.R EG_Bb Eucalyptus grandis genomic 3', genomic survey sequence.
JM506401.1:580-598
CCGACGACCATCCCGGTTCCGAACGGCGAC580CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba115C11.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM735371.1:540-558
CCGACGACCATCCCGGTTCCAAACGGCGAC540CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba156B03.F EG_Ba Eucalyptus grandis genomic 5', genomic survey sequence.
JM737625.1:207-225
CCGACGACCATCCCGGTTCCAAACGGCGAC207CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
EG_Ba031F08.R EG_Ba Eucalyptus grandis genomic 3', genomic survey sequence.
JM779734.1:515-533
CCGACGACCATCCCGGTTCCAAACGGCGAC515CCATCACCGAACCACCAGCTGCTCCTCGCCATTCCTCAGGTCAACCGTG
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:24791334-24791352
TTGTTGTTGTGGAACCTGTTCCCGAACCAA24791334CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCAAAGGCCGAAGC
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:25880853-25880871
TTGTCGTTGTGGAACCTGTTCCCGAACCAA25880853CCATCACCGAACCACCAGCCTCGGAGAAAGAAGAACCTAAGCCCGAAGC
Triticum aestivum genome assembly, chromosome: 3D.
LR862516.1:227009703-227009721
GAAGGCCTGGCAAGCACTCAGCCCGGCAGG227009703CCATCACCGAACCACCAGCGATCCACCTCACCGAGCAGGTAGTCACCCA
Aegilops sharonensis genome assembly, chromosome: 3S.
LR880968.1:411866064-411866082
GAAGGCCTGGAAAGCACTCAGCCCGGCAGG411866064CCATCACCGAACCACCAGCGATCCACCTCACCGAGTAGGTAGTCACTCA
Aegilops longissima genome assembly, chromosome: 3S.
LR881071.1:389522930-389522948
GAAGGCCTGGAAAGCACTCAGCCCGGCAGG389522930CCATCACCGAACCACCAGCGATCCACCTCACCGAGTAGGTAGTCACTCA
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737380.1:220758439-220758457
CGCACGCCCCAAACACTCGGTGCCAGACGG220758439CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737387.1:220334084-220334102
CGCACGCCCCAAACACTCGGTGCCAGACGG220334084CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737395.1:211259039-211259057
CGCGCACCCCAAACACTCGGTGCCAGACGG211259039CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGCGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737402.1:201398261-201398279
CGCGCACCCCAAACACTCGGTGCCAGACGG201398261CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGCGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737412.1:214692691-214692709
CGCGCGCCCCAAACACTCGGTGCCAGACGG214692691CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737419.1:205926767-205926785
CGCGCGCCCCAAACACTCGGTGCCAGACGG205926767CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737430.1:226976871-226976889
CGCGCGCCCCAAACACTCGGTGCCAGACGG226976871CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737437.1:219505559-219505577
CGCGCGCCCCAAACACTCGGTGCCAGACGG219505559CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737463.1:213799577-213799595
CGCGCACCCCGAACACTCGGTGCCAGACGG213799577CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGCGCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737477.1:212941821-212941839
CGTGCGCCCCAAACACTCGGTGCCAGACGG212941821CCATCACCGAACCACCAGCGTCTCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737501.1:396958014-396958032
TATGGCCATGAACTCCGTGCTTCACGATCT396958014CCATCACCGAACCACCAGCATGATCTTCATCGTCACCGGCGCCACACCA
Hordeum bulbosum genome assembly, chromosome: 5H_3.
OY737507.1:347379039-347379057
TATGGCCATGAACTCCGTGCTTCACGATCT347379039CCATCACCGAACCACCAGCATGATCTCCATCGTCACCGGCGCCACACCA
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737513.1:206416681-206416699
CGCGCGCCCCAAACACTCGGTGCCAGACGG206416681CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATTGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_4.
OY737513.1:207846353-207846371
CGCGCGCCCCAAACACTCGGTGCCAGACGG207846353CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATTGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737521.1:225196758-225196776
CGCCCGCCCCAAACACTCGGTGCCAGACGG225196758CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCCGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737535.1:213872858-213872876
CGCGCGCCCCAAACACTCGGTGCCAGACGG213872858CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCTGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_2.
OY737621.1:224788224-224788242
CGCGCGCCCCAAACACTCGGTGCCAGACGG224788224CCATCACCGAACCACCAGCGTCGCAGCCACCACCGTCATCGCCTGTGCC
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737869.1:209719122-209719140
CGCGCGCCCCAAACACTCGGTGCCAGACGG209719122CCATCACCGAACCACCAGCGTCGCAGCCACCACAGTCATTGCCCGTGCC
Agrobacterium tumefaciens strain Q15/94 plasmid pQ15_94_1, complete sequence.
CP049218.1:250437-250455
AAGGTGCCGGACAATGACCCGGCCCGTCAC250437CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATTTTCTACCGCGAG
Rhizobium hidalgonense strain JKLM 19E plasmid pPR19E01, complete sequence.
CP054028.1:1224506-1224524
AAGGTGCCGGACGGTGACCCGGCCCGTCAC1224506CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATATTCTACCGCGAG
Rhizobium indicum strain JKLM 13E plasmid pPR13E01, complete sequence.
CP054032.1:879105-879123
AAGGTGCCGGACAATGACCCGGCCCGTCAC879105CCATCACCGAACCACCAGCGTTGAAGGCGTGGAAATTTTCTACCGCGAG
Rhizobium leguminosarum strain OyaliB plasmid p1, complete sequence.
CP071400.1:508402-508420
AAGGTGCCGGACAATGACCCGGCCCGTCAC508402CCATCACCGAACCACCAGCGTTGAAGGAGTGGAAATTTTCTACCGCGAG
Vespula germanica genome assembly, chromosome: 3.
HG996530.1:5185044-5185062
CAATGATGAGAGGCTTAGCCAGCACGAATA5185044CCATCACCGAACCACCAGCCGTCCTTAGAGCAGCCAACAAACCTACCAC
Tenebrio molitor genome assembly, chromosome: 5.
OZ014542.1:2473113-2473131
TCCCCACAGAACACGTCTACATTCTCCCGG2473113CCATCACCGAACCACCAGCCGACATTCTGGTGGCCTTCAAGAAGGACGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCATCACCGAACCACCAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATCACCGAACCACCAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.445 | 3.436 | search_plus_done; http://172.18.8.135:50400/match?q=CCATCACCGAACCACCAGC&k=0&no_gap=0&offset=0&limit=50
3.595 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGGTGGTTCGGTGATGG&k=0&no_gap=0&offset=0&limit=0
3.595 | 0.000 | cgi_end;

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