GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:22:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pipistrellus pipistrellus genome assembly, chromosome: 8.
LR862364.1:36322488-36322507
CAGCGCAGAGGAGTCAGTCCTGGGTCCTGG36322488CCATCTGCAGTGAGAGTCAATCCTGGACTCAGGACTGACTCCCACAGCAG
Arachis hypogaea EST, cultivar Minhua6, clone GFBZZHF01DBOTZ.
LN678237.1:472-491
TTGGCTGGTACATCAAACACTGCACCATTT472CCATCTGCAGTGAGAGTCAAACCCTGCACAGCCTCAACCTGCT
TSA: Arachis hypogaea CL1Contig712.Arhy mRNA sequence.
EZ721696.1:708-727
TTGGCTGGTACATCAAACACTGCACCATTT708CCATCTGCAGTGAGAGTCAAACCCTGCACAGCCTCAACCTGCTCCTCGGG
Arachis hypogaea cultivar Shitouqi chromosome A05.
CP030987.1:86359245-86359264
TTGGCTGGTACATCAAACACTGCACCATTT86359245CCATCTGCAGTGAGAGTCAAACCCTGCACAGCCTCAACCTGCTCCTCGGG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:149175461-149175480
CTTGACTAGCACAACAAACACTGCACCATT149175461CCATCTGCAGTGAGAGTCAAATCCTGCACAGCCTCAACCTGCTACTTGGA
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:148032617-148032636
CTTGACTAGCACAACAAACACTGCACCATT148032617CCATCTGCAGTGAGAGTCAAATCCTGCACAGCCTCAACCTGCTACTTGGA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:149514494-149514513
CCCGAGGAGCAGGTTGAGGCTGTGCAGGGT149514494TTGACTCTCACTGCAGATGGAAATGGTGCAGTGTTTGATGTACCAGCCAA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:157038089-157038108
CCCGAGGAGCAGGTTGAGGCTGTGCAGGGT157038089TTGACTCTCACTGCAGATGGAAATGGTGCAGTGTTTGATGTACCAGCCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATCTGCAGTGAGAGTCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATCTGCAGTGAGAGTCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.183 | 0.174 | search_plus_done; http://172.18.8.135:50400/match?q=CCATCTGCAGTGAGAGTCAA&k=0&no_gap=0&offset=0&limit=50
0.205 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=TTGACTCTCACTGCAGATGG&k=0&no_gap=0&offset=0&limit=44
0.207 | 0.001 | cgi_end;

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