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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 07:37:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 844 from Patent WO2010034672.
HC495859.1:437-456
CGGCCATGAGAGGGTATAAAATGGTTTTAA437CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
Sequence 4173 from Patent WO2010034672.
HC499188.1:437-456
CGGCCATGAGAGGGTATAAAATGGTTTTAA437CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
Mdlv3_4033c08.y1 Mdlv3 Malus domestica cDNA clone Mdlv3_4033c08 5' similar to TR:Q43153 Q43153 CYSTEINE SYNTHASE PRECURSOR, mRNA sequence.
CV882302.1:182-201
CGGCCATGAGAGGGTATAAAATGGTTTTAA182CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
Mdlr7009E03.g1 Apple_EST_Mdlr Malus domestica cDNA similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
DR991765.1:57-76
CGGCCATGAGAGGGTATAAAATGGTTTTAA57CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
zfi02-8ms1-o01 Zfi02 Zamia fischeri cDNA clone zfi02-8ms1-o01 5', mRNA sequence.
DY036790.1:459-478
CAGCGGCCAAGGGTTACAGACTGATACTGA459CCATGCCATCTTACACAAGCCTCGAACGGCGAGTCACCATGCGGGCTTTT
000823AAFB002248HT (AAFB) Royal Gala apple skin peel, tree-ripened fruit 150 DAFB Malus domestica cDNA clone AAFB002248, mRNA sequence.
EB115250.1:290-309
CGGCCATGAGAGGGTATAAAATGGTTTTAA290CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
000818AALA002003HT (AALA) Royal Gala 150 DAFB fruit cortex Malus domestica cDNA clone AALA002003, mRNA sequence.
EB116027.1:457-476
CGGCCATGAGAGGGTATAAAATGGTTTTAA457CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
010129AARA003539HT (AARA) Royal Gala partially senescing leaf Malus domestica cDNA clone AARA003539, mRNA sequence.
EB121663.1:454-473
CGGCCATGAGAGGGTATAAAATGGTTTTAA454CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
010604AAWA006032HT (AAWA) Royal Gala 59 DAFB seeds Malus domestica cDNA clone AAWA006032, mRNA sequence.
EB133887.1:453-472
CGGCCATGAGAGGGTATAAAATGGTTTTAA453CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
010603AAXA005209HT (AAXA) Royal Gala 126 DAFB fruit core Malus domestica cDNA clone AAXA005209, mRNA sequence.
EB135960.1:527-546
CGGCCATGAGAGGGTATAAAATGGTTTTAA527CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
010626AAYA004234HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA004234, mRNA sequence.
EB137691.1:534-553
CGGCCATGAGAGGGTATAAAATGGTTTTAA534CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTNT
010626AAYA004276HT (AAYA) Royal Gala 126 DAFB fruit cortex Malus domestica cDNA clone AAYA004276, mRNA sequence.
EB137706.1:430-449
CGGCCATGAGAGGGTATAAAATGGTTTTAA430CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
021014ABCA005154HT (ABCA) Royal Gala fruit stored at 0.5 degrees C for 24 hours Malus domestica cDNA clone ABCA005154, mRNA sequence.
EB145415.1:442-461
CGGCCATGAGAGGGTATAAAATGGTTTTAA442CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
Zfi02b_72_D06_C017.g1 cDNA library derived from female gametophytes Zamia vazquezii cDNA clone 122Niy_H12 5', mRNA sequence.
FD769910.1:500-519
CAGCGGCCAAGGGTTACAGACTGATACTGA500CCATGCCATCTTACACAAGCCTCGAACGGCGAGTCACCATGCGGGCTTTT
Trifolium repens mRNA, clone: WCC09g05_075, unspecified EST.
FY457252.1:447-466
CTGCCATGAAGGGATATAAGATGGTTTTGA447CCATGCCATCTTACACAAGCTTGGAAAGAAGGGTTTGTATGAGAGCATTT
Mdfrg3155N24.g1 Apple_EST_Mdfrg Malus domestica cDNA 5' similar to gb|AAN86822.1| beta-cyanoalanine synthase [Betula pendula], mRNA sequence.
GO523818.1:537-556
CGGCCATGAGAGGGTATAAAATGGTTTTAA537CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
64E06 Flax fiber enriched Lambda ZapII Library Linum usitatissimum cDNA 3', mRNA sequence.
GW868476.1:258-277
CAGCAATGAAAGGGTATAAGATGGTTCTGA258CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGACAATGAGAGCATTC
LUSST4AD-T3-002_F23_15SEP2009_092 LUSST1AD Linum usitatissimum cDNA, mRNA sequence.
JG219572.1:541-560
CAGCAATGAAAGGGTATAAGATGGTTCTGA541CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGACAATGAGAGCATTC
Malus x domestica beta-cyanoalanine synthase 1 mRNA, complete cds.
DQ471308.1:543-562
CGGCCATGAGAGGGTATAAAATGGTTTTAA543CCATGCCATCTTACACAAGCTTGGAGAGAAGGGTGTGTATGAGATGCTTT
Trifolium repens isolate CAS_15 mitochondrial cyanoalanine synthase mRNA, complete cds; nuclear gene for mitochondrial product.
MN872238.1:452-471
CTGCCATGAAGGGATATAAGATGGTTTTGA452CCATGCCATCTTACACAAGCTTGGAAAGAAGGGTTTGTATGAGAGCATTT
Trifolium repens isolate TrCAS_tp mitochondrial cyanoalanine synthase gene, complete cds; nuclear gene for mitochondrial product.
OP437420.1:5092-5111
CTGCCATGAAGGGATATAAGATGGTTTTGA5092CCATGCCATCTTACACAAGCTTGGAAAGAAGGGTTTGTATGAGAGCATTT
TSA: Paeonia suffruticosa contig15488.Pasudosp mRNA sequence.
JI444829.1:992-1011
GAACGCTCTCATAGTCACCCTTCTTTCCAA992GCTTGTGTAAGATGGCATGGTTAAAACCATCTTGTATCCTTTCATAGCAG
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_9697 mRNA sequence.
JL890874.1:950-969
AAATGCTCTCATACAAACCCTTCTTTCCAA950GCTTGTGTAAGATGGCATGGTCAAAACCATCTTATATCCCTTCATGGCAG
Linum usitatissimum chromosome Lu11.
CP027621.1:8174899-8174918
GAATGCTCTCATTGTCACCCTTCTCTCCAA8174899GCTTGTGTAAGATGGCATGGTCAGAACCATCTTATACCCTTTCATTGCTG
Trifolium repens isolate ACLI19 chromosome 07_Pall.
CP125849.1:20188927-20188946
AAATGCTCTCATACAAACCCTTCTTTCCAA20188927GCTTGTGTAAGATGGCATGGTCAAAACCATCTTATATCCCTTCATGGCAG
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143364.1:19145902-19145921
AAAGCATCTCATACACACCCTTCTCTCCAA19145902GCTTGTGTAAGATGGCATGGTTAAAACCATTTTATACCCTCTCATGGCCG
Malus domestica genome assembly, chromosome: 7.
OU744997.1:19174092-19174111
AAAGCATCTCATACACACCCTTCTCTCCAA19174092GCTTGTGTAAGATGGCATGGTTAAAACCATTTTATACCCTCTCATGGCCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCATGCCATCTTACACAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATGCCATCTTACACAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.357 | 1.348 | search_plus_done; http://172.18.8.135:50400/match?q=CCATGCCATCTTACACAAGC&k=0&no_gap=0&offset=0&limit=50
1.484 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTGTGTAAGATGGCATGG&k=0&no_gap=0&offset=0&limit=29
1.488 | 0.004 | cgi_end;

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