GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 07:52:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Anas platyrhynchos genome assembly, chromosome: 22.
LS423632.1:2637530-2637549
CTGGAGCGATGAGGTAGGCCAGTCCTACAT2637530CCATGGAGGCAGAAATCGAGCGATGAGGTAGGCCAGTCCTATGTCTGTGG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT47J05, TM0295.
AP007314.2:7543-7562
CAACTCATTTTTTTTAATTCCAACTCACGA7543CCATGGAGGCAGAAATCGAGCGGTTGCGTGACGGCGAGGCGGAGATGTGG
Lotus japonicus genomic DNA, clone: LjB20E08, BM2151.
AP010877.1:66198-66217
CCACATCTCCGCCTCGCCGTCACGCAACCG66198CTCGATTTCTGCCTCCATGGTCGTGAGTTGGAATTAAAAAAAATGAGTTG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:127720068-127720087
CCACATCTCCGCCTCGCCGTCACGCAACCG127720068CTCGATTTCTGCCTCCATGGTCGTGAGTTGGAATTAAAAAAAATGAGTTG
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:190932651-190932670
TAGCGCCGTTAACTCCTTGGTCGCGAGGGC190932651CTCGATTTCTGCCTCCATGGCCGACGTTGTTGTTTTGTCCTCTGCTTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATGGAGGCAGAAATCGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATGGAGGCAGAAATCGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CCATGGAGGCAGAAATCGAG&k=0&no_gap=0&offset=0&limit=50
0.118 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=CTCGATTTCTGCCTCCATGG&k=0&no_gap=0&offset=0&limit=48
0.120 | 0.002 | cgi_end;

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