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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:28:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Larus fuscus genome assembly, chromosome: 9.
OZ010762.1:2136717-2136734
TATAACAGAGTATTCCATCATTGGAATGGA2136717CCATGGCCTCCTCCGTATTTTTTTAAATGTTGAACAGATATACATTTG
Sambucus nigra genome assembly, chromosome: 1.
OX422207.1:43129355-43129372
CTAACTCCTTCGGGTCCCTCCTTTTGGCCG43129355CCATGGCCTCCTCCGTATTCATGATTCTCCCGGCCTTAGCCACAAGTT
Sambucus nigra genome assembly, chromosome: 1.
OX422207.1:448930639-448930656
CAGCTTCTTTCTCATCTTCTCCCTTGGCCG448930639CCATGGCCTCCTCCGTATTCATGACTCTCTCGGTCGTAGCCAGAAGTT
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:246851209-246851226
TAGCCTCTTTTAGGTCATCTCTCTTAGATT246851209CCATGGCCTCCTCCGTATTCAATATTCTTTTGCCTGTTTGCTAGGAGT
Sambucus nigra genome assembly, chromosome: 7.
OX422213.1:108661594-108661611
CTAACTCCTTTTGGTCTCCCCTATAGGCCG108661594CCATGGCCTCCTCCGTATTTATGATTCTCCTGGGCTTAGAGAAAAGTT
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:225265995-225266012
TCACTCCTTTATTATCCTCTTCTTTTGCAT225265995CCATGGCCTCCTCCGTATTCACGACTCTCCCGGTCGTGGCTAGGAGTT
Sambucus nigra genome assembly, chromosome: 9.
OX422215.1:107428780-107428797
CTGGACTCTCCACGTCTCCTCTTTTGGTCT107428780CCATGGCCTCCTCCGTATTCATGATCCCTCATGCCGAAGAAGAAATTA
Sambucus nigra genome assembly, chromosome: 11.
OX422217.1:252407715-252407732
TTTCTCCTTTCTCAACATCTCCTTTGTCCG252407715CCATGGCCTCCTCCGTATTTATGACTCTCCTGGCCATAGTTAGGAGTT
Sambucus nigra genome assembly, chromosome: 13.
OX422219.1:9735540-9735557
TCTCTCCTTTATCATCCTCTCCCTTGGTAG9735540CCATGGCCTCCTCCGTATTCATGACTCTCTCGATCGTGGCTAGGAGTT
Sambucus nigra genome assembly, chromosome: 15.
OX422221.1:82067771-82067788
TGAACTCCTTTTTATCTCCCCTCTTGGGTA82067771CCATGGCCTCCTCCGTATTCATGATCCTCCCATCTGAAGCTAGGAGTT
Sambucus nigra genome assembly, chromosome: 18.
OX422224.1:296036044-296036061
TTGTTCCTTTATCATCCTCTCCCTTGGCTG296036044CCATGGCCTCCTCCGTATTCACGACTCTCCTGATCGTGGCTAGGAGTT
Nitrosococcus oceani ATCC 19707, complete genome.
CP000127.1:2729350-2729367
GCTCCATAAACTCAGACATATCAATACGGA2729350CCATGGCCTCCTCCGTATCGAACAGGAATGCCGCCAGAGCCTTACAAA
Nitrosococcus watsonii C-113 chromosome, complete genome.
CP002086.1:2427736-2427753
GCTCCATAAATTCGGACATATCAATACGGA2427736CCATGGCCTCCTCCGTATCGAACAGGAACATCGCCAGGGCCTTGCAAA
Candidatus Kuenenia stuttgartiensis isolate kuenenia_mbr1_ru-nijmegen genome assembly, chromosome: Kuenenia_stuttgartiensis_MBR1.
LT934425.1:557513-557530
ATCATAACATCCGCAGGAGGCATAGTTGAA557513CCATGGCCTCCTCCGTATTTTGTATTAGTAGTAACTGAACCGGTGGTA
Eristalis tenax genome assembly, chromosome: 5.
HG993128.1:42865324-42865341
CTAATCACATTGACTACACTGACTCCTGCG42865324CCATGGCCTCCTCCGTATCCACCTCCGTAGCCTCCTCCCAAGCCAATT
Halyzia sedecimguttata genome assembly, chromosome: 6.
OW569416.2:48354628-48354645
TTTCTCCGTTAAAGTCCAGAGTACCATCGA48354628CCATGGCCTCCTCCGTATTCAACTAAAAATTTCTGCATATTCTATAAC
Acholoe squamosa genome assembly, chromosome: 13.
OX439047.1:65172780-65172797
AAATTACTCCCTCCGTTACTCACTGGCATG65172780CCATGGCCTCCTCCGTATCCATTACGCACATCCCCACTGCTGCGAATC
Salpingus planirostris genome assembly, chromosome: 3.
OX460919.1:4059200-4059217
TGTTGCCCCCCGCTGTAACCCCCCGAGCCT4059200CCATGGCCTCCTCCGTATCCACCGTGACCCCCGAATCCTCCACTTTGA
Mystacides longicornis genome assembly, chromosome: 1.
OY756420.1:38250932-38250949
AGTTCAATATTCATGGACCTTCCTGACCAT38250932CCATGGCCTCCTCCGTATCCGTGATCACCTCCACCACCGCCGCCGCCG
Xiphydria camelus genome assembly, chromosome: 4.
OY783194.1:35900607-35900624
TAGGTTTATTCCGCAGAAGAGCTGCCGTCG35900607CCATGGCCTCCTCCGTATCGCTATGCTCCGATCCTAACAATTCCCAGA
Chroicocephalus ridibundus genome assembly, chromosome: 9.
OZ001742.1:48467770-48467787
CAAATGTATATCTGTTCAACATTTAAAAAA48467770ATACGGAGGAGGCCATGGTCCATTCCAATGATGGAATACTCTGTTATA
CCPW16314.b1_D23.ab1 CCP(UWX) Globe Artichoke Cynara cardunculus var. scolymus cDNA clone CCPW16314, mRNA sequence.
GE592420.1:522-539
GATACAGAAGATGAAAGACGGTACAGAGGT522ATACGGAGGAGGCCATGGGGAAAGTACGCAGCGGAGATCCGAGATCCA
38.A0401010.815 ZxSSHCAF Zygophyllum xanthoxylon cDNA, mRNA sequence.
JZ584493.1:151-168
TTCTGTAGAAGATGCTAAGTATGGAAGTAG151ATACGGAGGAGGCCATGGACATGGATACGGTGGCGGCTATGGAAAAGG
Triticum aestivum genome assembly, chromosome: 1A.
LR862508.1:356988865-356988882
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC356988865ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR862529.1:357296324-357296341
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC357296324ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR862550.1:362551173-362551190
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC362551173ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR865458.1:354842301-354842318
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC354842301ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR865479.1:360161350-360161367
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC360161350ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR865500.1:351441143-351441160
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC351441143ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR865739.1:355814391-355814408
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC355814391ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR865760.1:361647137-361647154
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC361647137ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR877309.1:354535970-354535987
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC354535970ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LR878435.1:356264009-356264026
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC356264009ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
LS992080.1:354295092-354295109
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC354295092ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum turgidum subsp. durum genome assembly, chromosome: 1A.
LT934111.1:347920437-347920454
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC347920437ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
OU015721.1:366117691-366117708
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC366117691ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Avena longiglumis genome assembly, chromosome: 5A.
OU342751.1:25294063-25294080
AAAAACCCTGTCCAAATAAAAAAGATCCAT25294063ATACGGAGGAGGCCATGGTGCGGCATCAGCGCGTGGTTTTGTTTAATT
Triticum aestivum genome assembly, chromosome: 1A.
OU343169.1:368503834-368503851
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC368503834ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum aestivum genome assembly, chromosome: 1A.
OU963872.1:360766443-360766460
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC360766443ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Sambucus nigra genome assembly, chromosome: 1.
OX422207.1:331538015-331538032
AACTTCTGGCTACAGTCGAGAGAATCATGA331538015ATACGGAGGAGGCCATGGCTGGTAAAGGAGAGAATGAAAAAGAAACTG
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:683946037-683946054
AACTCCCGACCATAACCGAGAGAATCATGA683946037ATACGGAGGAGGCCATGGCCGCCACAGAGGGGCACACAAAGGAGGCTA
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:714304556-714304573
AACTTCTAGCTTCGGTTGGGGTAGTCATGA714304556ATACGGAGGAGGCCATGGCGGCCTAGAGAGGAGATACGAAGGAGGCTA
Sambucus nigra genome assembly, chromosome: 3.
OX422209.1:320832704-320832721
AATTCCTGGCTACGATTAGGAGGGTCATGA320832704ATACGGAGGAGGCCATGGCGGCCAAGGGAGAGGATGAAAAAGATGATG
Sambucus nigra genome assembly, chromosome: 4.
OX422210.1:48080695-48080712
AACTTCTGGCTATAGTCGAGAGAATCATGA48080695ATACGGAGGAGGCCATGGTGAACAATATAAGTGCATAAAGGAGACAGG
Sambucus nigra genome assembly, chromosome: 8.
OX422214.1:386483065-386483082
AAATCCTTGATATAGTCAAAAGAGTTATGC386483065ATACGGAGGAGGCCATGGAGGCCAAGGGAGAAAATGATAAAGAAGCTG
Sambucus nigra genome assembly, chromosome: 9.
OX422215.1:263319833-263319850
AACTCCTGGCTATGATCGGGAGAGTCATGA263319833ATACGGAGGAGGCCATGGCGGCTAAGGGAGTGGATGGGAAAGAAGCTG
Sambucus nigra genome assembly, chromosome: 12.
OX422218.1:133115892-133115909
AACTTTTGGCAACGGTTGGGAAAATTAGGA133115892ATACGGAGGAGGCCATGGCGGCCAAGAGAGGTTACATTAAGGATGTCG
Sambucus nigra genome assembly, chromosome: 13.
OX422219.1:8165417-8165434
AACTCCTAGCCACGATCGAGAGAGTCATGA8165417ATACGGAGGAGGCCATGGCTACCAAGGGAGAGGATGATAAAGGAGCGA
Sambucus nigra genome assembly, chromosome: 13.
OX422219.1:215417775-215417792
AACTCTTGGATATGTCCAAAAGAGTCATGA215417775ATACGGAGGAGGCCATGGAGGCAGAGTGAGAGAATAAAAAAGAAGTTT
Sambucus nigra genome assembly, chromosome: 14.
OX422220.1:125782807-125782824
AACTCCTGTCCACGGTCGAGAAAGTCATGA125782807ATACGGAGGAGGCCATGGCTACCAAGGGAGAGGACGATAAAGGAGTTA
Sambucus nigra genome assembly, chromosome: 14.
OX422220.1:229404098-229404115
AATTCCTAGCTATGGACGAGAGAGTGATGA229404098ATACGGAGGAGGCCATGGCGCTAAAGGGAGAGGATGAGAAAGAATCTG
Triticum aestivum genome assembly, chromosome: 1A.
OX637225.1:289627404-289627421
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC289627404ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum monococcum genome assembly, chromosome: 1A.
OY737850.1:386853328-386853345
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC386853328ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Triticum monococcum genome assembly, chromosome: 1A.
OY737858.1:386934638-386934655
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC386934638ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Cochlearia excelsa genome assembly, chromosome: 1.
OY748327.1:8715923-8715940
CCATGGAGGATACAGAGGAGGCCATGGAGG8715923ATACGGAGGAGGCCATGGAGGATACGGAGGAAAAACTGTTCAGACTCA
Triticum timopheevii genome assembly, chromosome: 1At.
OY997261.1:362326410-362326427
CGAGGAAGAAGAGTCAACAGTGAAGAGCAC362326410ATACGGAGGAGGCCATGGGGTCCAAGGGAATCCTCAAGAACAGCGGCT
Sympetrum striolatum genome assembly, chromosome: 3.
OX388343.1:30681079-30681096
AGGAGGCCACGGCATCGGCAGCGGAATTTC30681079ATACGGAGGAGGCCATGGCATTGGTCTCAGCAGCATTGGATACGGACA
Geotrupes spiniger genome assembly, chromosome: 3.
OY390733.1:45858722-45858739
TCATGGCGGATACGGGGGAGGCCATGGTGG45858722ATACGGAGGAGGCCATGGTGGATATGGAGGAGGCCATGGCGGATATGG
Nephrotoma guestfalica genome assembly, chromosome: 3.
OY829915.1:259627917-259627934
CGGTGGATATGGTGGTGAACATGGTGGAGG259627917ATACGGAGGAGGCCATGGTGGAGATGGTGGATATGGACATGGTGGAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCATGGCCTCCTCCGTAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATGGCCTCCTCCGTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.144 | search_plus_done; http://172.18.8.135:50400/match?q=CCATGGCCTCCTCCGTAT&k=0&no_gap=0&offset=0&limit=50
0.442 | 0.290 | search_minus_done; http://172.18.8.135:50400/match?q=ATACGGAGGAGGCCATGG&k=0&no_gap=0&offset=0&limit=30
0.468 | 0.026 | cgi_end;

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