GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 05:00:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vicia faba genome assembly, chromosome: 3.
OX451738.1:110983015-110983038
AAAAAGGAACAATGCATGTTCCATGGGAAA110983015CCATTGAAGAGTGCATGTAGGAAAATAAAGGACGAATGACAAAGCACTATAAAT
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:438117542-438117565
AAGACCGTGATTATATTCTGATTGCATCAT438117542CCATTGAAGAGTGCATGTAGGAAAATCAAGGATGAATGCTGAAGCACTATATAT
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:606098336-606098359
AAGATTATGATTATGTTCTAATGGCATCAT606098336CCATTGAAGAGTGCATGTAGGAAAAACAAGGACGGGTGCCGAAGCACTATATAT
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:606137340-606137363
AAGATTATGATTATATTCTGATGGCATCAT606137340CCATTGAAGAGTGCATGTAGGAAAAACTAGGACGGACGCCGAAGCACTATATAT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:480167642-480167665
AAGATCATAATTATTTTTCAATGGCATCAT480167642CCATTGAAGAGTGCATGTAGGAAAAGCAAGGATGAATGCCAAAGTATTATCTAT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:573224108-573224131
AAGATAATGGTTATGTTCCGATGACATCAT573224108CCATTGAAGAGTGCATGTAGGAAAAGTTAAGACGAATGTCGAAGCACTATATAT
Lathyrus sativus genome assembly, chromosome: 5.
OZ012739.1:573385623-573385646
AAGATAATGGTTATGTTCCGATGACATCAT573385623CCATTGAAGAGTGCATGTAGGAAAAGTTAAGACGAATGTCGAAGCACTATATAT
Lathyrus aphaca genome assembly, chromosome: 1.
OZ014519.1:634100629-634100652
AAGATCGCGATTATATTTTGATTGCATCAT634100629CCATTGAAGAGTGCATGTAGGAAAATTGAGGACGAATGCCGAAACACTATATAT
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:302592594-302592617
ATATATCATGCTTTGGCGTTCCTCCTCGCT302592594TTTCCTACATGCACTCTTCAATGGTTTTCAATTGGAACCTGCATTATTCCTTTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATTGAAGAGTGCATGTAGGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATTGAAGAGTGCATGTAGGAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CCATTGAAGAGTGCATGTAGGAAA&k=0&no_gap=0&offset=0&limit=50
0.126 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCTACATGCACTCTTCAATGG&k=0&no_gap=0&offset=0&limit=42
0.127 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).