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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-07 13:04:55, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus genomic DNA, chromosome 2, clone: LjB10A07, BM1477b.
AP009544.1:18643-18662
CAGATTGTTCTAGAAGGTGATTTGTATAAT18643CCATTGGCGTTTATCAAGCGATCCACATGATCATGCTGCTGTTGCTGAGC
Muschampia proto genome assembly, chromosome: 12.
OZ199991.1:586601-586620
CTACGAATGCCATTCCAGTCGAGAGGTATT586601CCATTGGCGTTTATCAAGCGGGCCGCAGGGCCTACTACTTTATTTAATAT
Comibaena bajularia genome assembly, chromosome: 2.
OZ228982.1:11298007-11298026
GTTTTGTTACAATTTTATAAGGCTCATATA11298007CCATTGGCGTTTATCAAGCGTTGGCGTGTTTTTTTCTACGTCGCGTCGTA
Lotus japonicus CCS52A1-LIKE2 gene for hypothetical protein, complete cds.
AB871652.1:97-116
GCTCAGCAACAGCAGCATGATCATGTGGAT97CGCTTGATAAACGCCAATGGATTATACAAATCACCTTCTAGAACAATCTG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:92677103-92677122
GCTCAGCAACAGCAGCATGATCATGTGGAT92677103CGCTTGATAAACGCCAATGGATTATACAAATCACCTTCTAGAACAATCTG
Muschampia proto genome assembly, chromosome: 20.
OZ199999.1:12625971-12625990
ATATTAAATAAAGTAGTAGGCCCTGCGGCC12625971CGCTTGATAAACGCCAATGGAATACCTCTCGACTGGAATGGCATTCGTAG
Muschampia proto genome assembly, chromosome: 20.
OZ199999.1:13904290-13904309
ATATTAAATAAAGTAGTAGGCCCTGCGGCC13904290CGCTTGATAAACGCCAATGGAATACCTCTCGACTGGAATGGCATTCGTAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCATTGGCGTTTATCAAGCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATTGGCGTTTATCAAGCG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.435 | 0.426 | search_plus_done; http://172.18.8.135:50900/match?q=CCATTGGCGTTTATCAAGCG&k=0&no_gap=0&offset=0&limit=50
0.763 | 0.328 | search_minus_done; http://172.18.8.135:50900/match?q=CGCTTGATAAACGCCAATGG&k=0&no_gap=0&offset=0&limit=47
0.765 | 0.003 | cgi_end;

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