GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 21:57:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Atr01b_26_E03_C010.g1 FGP Male Amborella trichopoda Amborella trichopoda cDNA clone 122KGl_I05 5', mRNA sequence.
FD426844.1:50-69
TTAGGATTATTAGAGGGATCACTTCAACGC50CCATTTTACTCTCGGCTCCAGTTATGGTATATAATTTCATTCTCTAAATT
Atr02b_142_B07_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CSX_C14 5', mRNA sequence.
FD442624.1:542-561
TTAGGATTATTAGAGGGATCACTTCAACGC542CCATTTTACTCTCGGCTCCAGTTATGGGGTGCAGCTCTTCCAACAAATAG
Nemurella pictetii genome assembly, chromosome: 5.
OV121120.1:13160516-13160535
CTCATGTCAGTAGGAACGTAACATCAACAA13160516TGGAGCCGAGAGTAAAATGGCCCGTGCACGACTTGGTTGTAGCAGTGACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCATTTTACTCTCGGCTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCATTTTACTCTCGGCTCCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.208 | 0.200 | search_plus_done; http://172.18.8.135:50400/match?q=CCATTTTACTCTCGGCTCCA&k=0&no_gap=0&offset=0&limit=50
0.248 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGCCGAGAGTAAAATGG&k=0&no_gap=0&offset=0&limit=48
0.248 | 0.001 | cgi_end;

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