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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:05:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cicer arietinum chromosome Ca3.
CP039333.1:38554002-38554021
AAGAATGAACACATCTCTGCTGACCTATAT38554002CCCAAAGCCTACAAGGAAAGATGGAAAGATTATTAGTCAACCACACAATA
Cicer arietinum chromosome Ca3.
CP040768.1:38554002-38554021
AAGAATGAACACATCTCTGCTGACCTATAT38554002CCCAAAGCCTACAAGGAAAGATGGAAAGATTATTAGTCAACCACACAATA
Aelia acuminata genome assembly, chromosome: X.
OU426980.1:5660959-5660978
CACTAAAGTTGAATAATTTACTGAAGCTAC5660959CCCAAAGCCTACAAGGAAAGCATCCCCAGAGAAAATAGGAATAGCTACTA
Xylota segnis genome assembly, chromosome: 4.
OY757239.1:33017731-33017750
TTCTATAGTCCATACCTTAGGCAAACTAAG33017731CCCAAAGCCTACAAGGAAAGCCTGGCTTAAATTTCCATTGTAAATTAAGG
Trifolium pratense DNA, clone:RC0126f.ab1.
DE244807.1:253-272
TGTTTGCTATATGCTTGACAATTGTCACAT253CTTTCCTTGTAGGCTTTGGGATCTTGGTCAGCAAAGATGTGTGCATTCTT
Cicer arietinum chromosome Ca4.
CP039334.1:5275372-5275391
TGTTTGTTATATGGTTGACAAATGTCACAT5275372CTTTCCTTGTAGGCTTTGGGATCTTGGTCAGCAACGTTGTGTGCATTCTT
Cicer arietinum chromosome Ca4.
CP040769.1:5275372-5275391
TGTTTGTTATATGGTTGACAAATGTCACAT5275372CTTTCCTTGTAGGCTTTGGGATCTTGGTCAGCAACGTTGTGTGCATTCTT
Trifolium repens isolate ACLI19 chromosome 01_Occ.
CP125836.1:44897180-44897199
TGTTTGTTATATGCTTGACAATTGTCACAT44897180CTTTCCTTGTAGGCTTTGGGATCTCGGTCAGCAAAGATGTGTGCATTCTT
Trifolium repens isolate ACLI19 chromosome 01_Pall.
CP125837.1:44557620-44557639
TGTTTGTTATATGCTTGACAATTGTCACAT44557620CTTTCCTTGTAGGCTTTGGGATCTCGGTCAGCAAAGATGTGTGCATTCTT
Medicago arabica genome assembly, chromosome: 2.
OX326965.1:49482176-49482195
TGTTTGTTATAAGCTTGACAAATGTCACAC49482176CTTTCCTTGTAGGCTTTGGGATCTCGGTCAGCAACGTTGTGTGCATTCGT
Trifolium dubium genome assembly, chromosome: 3.
OX638064.1:47640214-47640233
TGTTTGTTATATGCTTGACAAATGTCACAT47640214CTTTCCTTGTAGGCTTTGGGATCTCGGTCAACAACGATGTGTGCATTCCT
Trifolium dubium genome assembly, chromosome: 13.
OX638074.1:25831240-25831259
TGTTTGTTATATGCTTGACAAATGTCGCAT25831240CTTTCCTTGTAGGCTTTGGGATCTCGGTCAACAACGATGTGTGCATTCCT
Trifolium fragiferum genome assembly, chromosome: 8.
OX940796.1:46440743-46440762
TGTTTGTTAAATGTTTGATAATTGTCACAT46440743CTTTCCTTGTAGGCTTTGGGATCTCGGTCAGCAAAGATGTGTTCATTCTT
Astragalus glycyphyllos genome assembly, chromosome: 3.
OY754309.1:58047426-58047445
TATTTGTTAAAAGGTTGACAAAGTGACCAT58047426CTTTCCTTGTAGGCTTTGGGATCTTGGTCAGCAACGTTGTGTGCATTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCAAAGCCTACAAGGAAAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCAAAGCCTACAAGGAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CCCAAAGCCTACAAGGAAAG&k=0&no_gap=0&offset=0&limit=50
0.318 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTCCTTGTAGGCTTTGGG&k=0&no_gap=0&offset=0&limit=46
0.325 | 0.007 | cgi_end;

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