GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-13 05:44:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

JP 2015527081-A/1: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
HZ412450.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
JP 2015527085-A/9: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ412816.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
JP 2015531598-A/9: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ467114.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
KR 1020150043540-A/1: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
LG058384.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
KR 1020150046345-A/9: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP) FOR GENE TARGETING AND TRAIT STACKING.
LG058636.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
KR 1020150052241-A/9: FLUORESCENCE ACTIVATED CELL SORTING (FACS) ENRICHMENT TO GENERATE PLANTS.
LG058863.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
JP 2018171074-A/1: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
MC411792.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Sequence 1 from patent US 9914930.
MI463156.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Sequence 1 from patent US 10526610.
MO636587.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Sequence 9 from patent US 10640779.
MV136279.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Sequence 1 from patent US 10961540.
MX514076.1:14440-14459
CCTGACGTCTTTGGTTCTCTGTAGTATCTT14440CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
EL2473F Brassica embryo library (EL) Brassica napus cDNA clone EL2473 3', mRNA sequence.
CN827705.1:282-301
CCTGACGTCTTTGGTTCTCTGTAGTATCTT282CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR020931 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-008C06 5', mRNA sequence.
EX036287.1:238-257
CCTGACGTCTTTGGTTCTCTGTAGTATCTT238CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR024307 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-068D06 5', mRNA sequence.
EX039663.1:245-264
CCTGACGTCTTTGGTTCTCTGTAGTATCTT245CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR049221 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-01H11 5', mRNA sequence.
EX064577.1:245-264
CCTGACGTCTTTGGTTCTCTGTAGTATCTT245CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR049668 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-10F10 5', mRNA sequence.
EX065024.1:245-264
CCTGACGTCTTTGGTTCTCTGTAGTATCTT245CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR049685 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-10H04 5', mRNA sequence.
EX065041.1:245-264
CCTGACGTCTTTGGTTCTCTGTAGTATCTT245CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
BR049825 pollen cDNA library KBPL Brassica rapa subsp. pekinensis cDNA clone KBPL-12G12 5', mRNA sequence.
EX065181.1:245-264
CCTGACGTCTTTGGTTCTCTGTAGTATCTT245CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF01P09, 3'-end sequence.
FY068723.1:331-350
CCTGACGTCTTTGGTTCTCTGTAGTATCTT331CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
Brassica rapa subsp. pekinensis mRNA, clone: BBRAF40J24, 3'-end sequence.
FY426524.1:258-277
CCTGACGTCTTTGGTTCTCTGTAGTATCTT258CCCAACACATGTTTAGCTGATTTCGTGGCATCAACCAAGTGATAGTGAGG
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:22167439-22167458
CCTGACGTCTTTGGTTCTCTGTAGTATCTT22167439CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Brassica napus genome assembly, chromosome: A04.
HG994358.1:16657053-16657072
CCTGACGTCTTTGGTTCTCTGTAGTATCTT16657053CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Brassica rapa genome, scaffold: A04.
LR031576.1:15498785-15498804
CCTGACGTCTTTGGTTCTCTGTAGTATCTT15498785CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:15871844-15871863
CCTGACGTCTTTGGTTCTCTGTAGTATCTT15871844CCCAACACATGTTTAGCTGATTTCGTCTGTCGCATATCATTAATTAAGAT
Nasturtium officinale genome assembly, chromosome: 13.
OY978511.1:5497039-5497058
CCTGACCTCTTTGGTTCTCTGTAGTATCTT5497039CCCAACACATGTTTAGCTGATTTCGTCTGTCAATTATATAAAAAAAAAAA
Sequence 33 from Patent WO2005118814.
CS246973.1:1021-1040
CCTCACTATCACTTGGTTGATGCCACGAAA1021TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2008501323-A/33: METABOLICALLY ENGINEERED CELLS FOR THE PRODUCTION OF POLYUNSATURATED FATTY ACIDS.
DL074835.1:1021-1040
CCTCACTATCACTTGGTTGATGCCACGAAA1021TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Sequence 134940 from Patent WO2008034648.
FB915667.1:1007-1026
CCTCACTATCACTTGGTTGATGCCACGAAA1007TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Sequence 33 from patent US 7736884.
GX280359.1:1021-1040
CCTCACTATCACTTGGTTGATGCCACGAAA1021TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Sequence 134940 from Patent EP2090662.
HB785726.1:1007-1026
CCTCACTATCACTTGGTTGATGCCACGAAA1007TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527081-A/7: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
HZ412456.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527081-A/82: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
HZ412531.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527081-A/84: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
HZ412533.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527085-A/15: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ412822.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527085-A/144: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ412951.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015527085-A/146: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ412953.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015531598-A/15: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ467120.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015531598-A/144: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ467249.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
JP 2015531598-A/146: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP).
HZ467251.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Sequence 64 from Patent WO2013112523.
JC246077.1:943-962
CCTCACTATCACTTGGTTGATGCCACGAAA943TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Sequence 64 from patent US 9598701.
KH698506.1:943-962
CCTCACTATCACTTGGTTGATGCCACGAAA943TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150043540-A/7: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
LG058390.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150043540-A/82: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
LG058465.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150043540-A/84: FAD3 PERFORMANCE LOCI AND CORRESPONDING TARGET SITE SPECIFIC BINDING PROTEINS CAPABLE OF INDUCING TARGETED BREAKS.
LG058467.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150046345-A/15: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP) FOR GENE TARGETING AND TRAIT STACKING.
LG058642.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150046345-A/144: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP) FOR GENE TARGETING AND TRAIT STACKING.
LG058771.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150046345-A/146: ENGINEERED TRANSGENE INTEGRATION PLATFORM (ETIP) FOR GENE TARGETING AND TRAIT STACKING.
LG058773.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150052241-A/15: FLUORESCENCE ACTIVATED CELL SORTING (FACS) ENRICHMENT TO GENERATE PLANTS.
LG058869.1:2888-2907
ATCTTAATTAATGATATGCGACAGACGAAA2888TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150052241-A/144: FLUORESCENCE ACTIVATED CELL SORTING (FACS) ENRICHMENT TO GENERATE PLANTS.
LG058998.1:13038-13057
ATCTTAATTAATGATATGCGACAGACGAAA13038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
KR 1020150052241-A/146: FLUORESCENCE ACTIVATED CELL SORTING (FACS) ENRICHMENT TO GENERATE PLANTS.
LG059000.1:13032-13051
ATCTTAATTAATGATATGCGACAGACGAAA13032TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
RT3085 Chinese cabbage root library Brassica rapa subsp. pekinensis cDNA clone RT3085 5', mRNA sequence.
CV434031.1:272-291
CCTCACTATCACTTGGTTGATGCCACGAAA272TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
EX20LIB4_UP_011_G12_02FEB2004_084 Brassica napus EX20LIB4 Brassica napus cDNA 5', mRNA sequence.
CX273864.1:156-175
CCTCACTATCACTTGGTTGATGCCACGAAA156TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
EX20LIB4_UP_043_C08_01MAR2004_060 Brassica napus EX20LIB4 Brassica napus cDNA 5', mRNA sequence.
CX276070.1:156-175
CCTCACTATCACTTGGTTGATGCCACGAAA156TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Brassica rapa subsp. pekinensis mRNA, clone: BRest08-J07, 5'-end sequence.
DC846002.1:48-67
CCTCACTATCACTTGGTTGATGCCACGAAA48TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
204c02 longbai no.2 one month old leaves Brassica rapa subsp. pekinensis cDNA, mRNA sequence.
DN964128.1:156-175
CCTCACTATCACTTGGTTGATGCCACGAAA156TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
13JKBNM2_UP_007_D04_08DEC2003_026 13JKBNM2 Brassica napus cDNA 5', mRNA sequence.
ES263742.1:505-524
CCTCACTATCACTTGGTTGATGCCACGAAA505TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
BR029720 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-140F02 5', mRNA sequence.
EX045076.1:352-371
CCTCACTATCACTTGGTTGATGCCACGAAA352TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
BR110969 etiolated mature leaf cDNA library KHLW Brassica rapa subsp. pekinensis cDNA clone KHLW-21G04 5', mRNA sequence.
EX127139.1:699-718
CCTCACTATCACTTGGTTGATGCCACGAAA699TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
BNAPO1GH_T3_014_D03_15JUN2007_025 BNAPO1GH Brassica napus cDNA 5', mRNA sequence.
GR451374.1:715-734
CCTCACTATCACTTGGTTGATGCCACGAAA715TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_2232.
FX700135.1:1038-1057
CCTCACTATCACTTGGTTGATGCCACGAAA1038TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Camelina sativa cultivar CO46 chromosome 16.
CP131546.1:5073788-5073807
TTGTTTAATTTGAATGATTGACAGACAAAA5073788TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCACAGACGTCAGG
Brassica napus fatty acid desaturase 3 (FAD3) gene, complete cds.
FJ985689.1:2222-2241
CCTCACTATCACTTGGTTGATGCCACGAAA2222TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Brassica juncea fatty acid desaturase 3 gene, complete cds.
HM138371.1:2794-2813
ATCTTAATTAATGATATGCGACAGACGAAA2794TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Brassica juncea microsomal omega-3 fatty acid desaturase (Fad3) mRNA, complete cds.
HM568876.1:943-962
CCTCACTATCACTTGGTTGATGCCACGAAA943TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Brassica napus fatty acid desaturase BnaA.FAD3.b gene, complete cds.
JN992612.1:2785-2804
ATCTTAATTAATGATATGCGACAGACGAAA2785TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Brassica napus fatty acid desaturase BnaA.fad3.b-SW_Hickory mutant gene, complete cds.
JN992613.1:2790-2809
ATCTTAATTAATGATATGCGACAGACGAAA2790TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Camelina sativa cultivar CAS-CsA microsomal linoleate desaturase (FAD3_3) mRNA, complete cds.
KJ541076.1:973-992
CCTCACTATCACTTGGTCGATGCCACAAAA973TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCACAAACGTCAGG
Brasicca napus omega-3 fatty acid desaturase (Fad3) mRNA, complete cds.
L22962.1:1021-1040
CCTCACTATCACTTGGTTGATGCCACGAAA1021TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Camelina sativa cultivar DKDH0065 omega-3 fatty acid desaturase (FAD3) mRNA, complete cds.
MG253926.1:973-992
CCTCACTATCACTTGGTCGATGCCACAAAA973TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCACAGACGTCAGG
Brassica napus cultivar A28 chromosome A4 fatty acid desaturase 3 (FAD3) gene, complete cds.
OR676831.1:943-962
CCTCACTATCACTTGGTTGATGCCACGAAA943TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGACGTCAGG
Nasturtium officinale genome assembly, chromosome: 6.
OY978504.1:6219256-6219275
TTAATTAGTGATATAATTTGACAGACGAAA6219256TCAGCTAAACATGTGTTGGGAAGATACTACAGAGAACCAAAGAGGTCAGG
Asteroscopus sphinx genome assembly, chromosome: 14.
OX453015.1:17555762-17555781
ACTATTTTTTTAACTAAATTGATGGTCTTC17555762TCAGCTAAACATGTGTTGGGTTTCGGATTTTGGGCCATAAATTCAAAGTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCAACACATGTTTAGCTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCAACACATGTTTAGCTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.507 | 1.498 | search_plus_done; http://172.18.8.135:50400/match?q=CCCAACACATGTTTAGCTGA&k=0&no_gap=0&offset=0&limit=50
3.010 | 1.503 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGCTAAACATGTGTTGGG&k=0&no_gap=0&offset=0&limit=25
3.040 | 0.030 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).