GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 15:47:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA clone:PM032c11_r, 5' end.
AV433675.1:346-365
GCGGCAAACCAGGCGGCCATGGCCAACAAC346CCCAACCTGCAGCAATTTATGCGGCTACAGCAGCAGCAGCAGCAGCAGCA
Dioctria rufipes genome assembly, chromosome: 3.
OZ002742.1:179800043-179800062
TTTCGAATGAAGTGCACTACAATTTAATCA179800043CCCAACCTGCAGCAATTTATAAATAAATAATAAATAAATTTTCATTAGAA
Bufo bufo genome assembly, chromosome: 2.
LR991668.1:332790952-332790971
TTTAACTCCCTCTGCCGCAGCTATGCCAAA332790952ATAAATTGCTGCAGGTTGGGAACCTGCACAGCACACCGTCCGAAGACAGC
Accipiter gentilis genome assembly, chromosome: 17.
OV839378.1:5116043-5116062
TGTAGGTACAAACCCTGCCTGTGTCTTCAA5116043ATAAATTGCTGCAGGTTGGGGCTCTGGAGGTGCCCAGCCTCTTCCTTGAG
Haliaeetus albicilla genome assembly, chromosome: 16.
OX381653.1:5248320-5248339
TGTAGGTACGAACCCTGCCTGTGTCTTCAA5248320ATAAATTGCTGCAGGTTGGGGCTCTGGAGGTGCCCAGCCTCTTCCTTGAG
Triglochin maritima genome assembly, chromosome: 9.
OY821778.1:1508544-1508563
AAACTAATGATTCTCATTTATGGCGTTTAA1508544ATAAATTGCTGCAGGTTGGGAGGGACATGGGCGAAGCGACCACTTTTGCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCAACCTGCAGCAATTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCAACCTGCAGCAATTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CCCAACCTGCAGCAATTTAT&k=0&no_gap=0&offset=0&limit=50
0.137 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=ATAAATTGCTGCAGGTTGGG&k=0&no_gap=0&offset=0&limit=48
0.140 | 0.003 | cgi_end;

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