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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-03-20 03:31:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Medicago sativa cultivar Chilean F0D_8491 mRNA sequence.
JL874918.1:1001-1022
GCTACTGCCACTGTCTCTGAAAAATCTTTT1001CCCAAGTTTCCCAAAACATAGTTAATTGTCACCCACAAATAAGAACCTTCTT
Genomic sequence for Medicago truncatula, clone MTABa0058M19, complete sequence.
AC145753.1:76961-76982
ATTGCCTCTGAAAAATCCTTTTGTGTGTTT76961CCCAAGTTTCCCAAAACATAGTTAATTGTCACCTACACATATATGTTGCAAG
Genomic sequence for Medicago truncatula, clone MTABa0058M19, complete sequence.
AC145753.1:83029-83050
GCTACTGCCACTGTCTCTGAAAAATCTTTT83029CCCAAGTTTCCCAAAACATAGTTAATTGTCACCTACACAAATGTTGCAAGGT
Medicago lupulina genome assembly, chromosome: 2.
OY283140.1:15181972-15181993
GCCACTGCCACTGTCTCTGAAAAATCTTTT15181972CCCAAGTTTCCCAAAACATAGTTAATTGTCACCTACACAAATGTTGCACGGT
NF010B12IN1F1094 Insect herbivory Medicago truncatula cDNA clone NF010B12IN 5', mRNA sequence.
BE322109.2:556-577
AAGAAGGTTCTTATTTATGGGTGACAATTA556ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF087E07ST1F1051 Developing stem Medicago truncatula cDNA clone NF087E07ST 5', mRNA sequence.
BE325396.2:183-204
AAGAAGGTTCTTATTTATGGGTGACAATTA183ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF094A12PL1F1087 Phosphate starved leaf Medicago truncatula cDNA clone NF094A12PL 5', mRNA sequence.
BF639165.1:324-345
AAGAAGGTTCTTATTTATGGGTGACAATTA324ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF051D04IN1F1041 Insect herbivory Medicago truncatula cDNA clone NF051D04IN 5', mRNA sequence.
BF641307.1:548-569
AAGAAGGTTCTTATTTATGGGTGACAATTA548ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF046D10IN1F1080 Insect herbivory Medicago truncatula cDNA clone NF046D10IN 5', mRNA sequence.
BG449273.1:551-572
AAGAAGGTTCTTATTTATGGGTGACAATTA551ACTATGTTTTGGGAAACTTGGGAAAANATT
NF055E12IN1F1097 Insect herbivory Medicago truncatula cDNA clone NF055E12IN 5', mRNA sequence.
BG449660.1:518-539
AAGAAGGTTCTTATTTATGGGTGACAATTA518ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCANAAACAGTGGCAGTANC
NF053G02IN1F1017 Insect herbivory Medicago truncatula cDNA clone NF053G02IN 5', mRNA sequence.
BG449843.1:549-570
AAGAAGGTTCTTATTTATGGGTGACAATTA549ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF106E11PL1F1085 Phosphate starved leaf Medicago truncatula cDNA clone NF106E11PL 5', mRNA sequence.
BG457694.1:324-345
AAGAAGGTTCTTATTTATGGGTGACAATTA324ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF004G10IN1F1084 Insect herbivory Medicago truncatula cDNA clone NF004G10IN 5', mRNA sequence.
BI265005.1:522-543
AAGAAGGTTCTTATTTATGGGTGACAATTA522ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF004G07IN1F1056 Insect herbivory Medicago truncatula cDNA clone NF004G07IN 5', mRNA sequence.
BI265090.1:558-579
AAGAAGGTTCTTATTTATGGGTGACAATTA558ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCANAGACAGTGGCAGTAGC
NF077G05IN1F1040 Insect herbivory Medicago truncatula cDNA clone NF077G05IN 5', mRNA sequence.
BI265201.1:555-576
AAGAAGGTTCTTATTTATGGGTGACAATTA555ACTATGTTTTGGGAAACTTGGGGAAAAGATTT
NF093G10IN1F1084 Insect herbivory Medicago truncatula cDNA clone NF093G10IN 5', mRNA sequence.
BI265356.1:554-575
AAGAAGGTTCTTATTTATGGGTGACAATTA554ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF093F11IN1F1095 Insect herbivory Medicago truncatula cDNA clone NF093F11IN 5', mRNA sequence.
BI265759.1:551-572
AAGAAGGTTCTTATTTATGGGTGACAATTA551ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF085G04IN1F1036 Insect herbivory Medicago truncatula cDNA clone NF085G04IN 5', mRNA sequence.
BI266110.1:535-556
AAGAAGGTTCTTATTTATGGGTGACAATTA535ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCANAGACAGTGGCAGTAGC
NF091D06IN1F1058 Insect herbivory Medicago truncatula cDNA clone NF091D06IN 5', mRNA sequence.
BI266318.1:232-253
AAGAAGGTTCTTATTTATGGGTGACAATTA232ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF094A07IN1F1053 Insect herbivory Medicago truncatula cDNA clone NF094A07IN 5', mRNA sequence.
BI266386.1:551-572
AAGAAGGTTCTTATTTATGGGTGACAATTA551ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC
NF105C11IN1F1086 Insect herbivory Medicago truncatula cDNA clone NF105C11IN 5', mRNA sequence.
BI266568.1:548-569
AAGAAGGTTCTTATTTATGGGTGACAATTA548ACTATGTTTTGGGAAACTTGGGAAAAGATT
NF105B10IN1F1089 Insect herbivory Medicago truncatula cDNA clone NF105B10IN 5', mRNA sequence.
BI267321.1:545-566
AAGAAGGTTCTTATTTATGGGTGACAATTA545ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCANAGACAGTGGCAGTAGC
NF114A04IN1F1033 Insect herbivory Medicago truncatula cDNA clone NF114A04IN 5', mRNA sequence.
BI267898.1:541-562
AAGAAGGNTCTTATTTATGGGTGACAATTA541ACTATGTTTTGGGAAACTTGGGA
s13dNF47G02AT020_516154 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX527821.1:550-571
AAGAAGGTTCTTATTTATGGGTGACAATTA550ACTATGTTTTGGGAAACTTGGGAAAAG
Medicago truncatula apyrase-like protein (APY1;5) mRNA, complete cds.
AY180381.1:556-577
AAGAAGGTTCTTATTTATGGGTGACAATTA556ACTATGTTTTGGGAAACTTGGGAAAAGATTTTTCAGAGACAGTGGCAGTAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCAAGTTTCCCAAAACATAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCAAGTTTCCCAAAACATAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.519 | 1.510 | search_plus_done; http://172.18.8.135:50400/match?q=CCCAAGTTTCCCAAAACATAGT&k=0&no_gap=0&offset=0&limit=50
1.938 | 0.419 | search_minus_done; http://172.18.8.135:50400/match?q=ACTATGTTTTGGGAAACTTGGG&k=0&no_gap=0&offset=0&limit=46
1.952 | 0.014 | cgi_end;

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