GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-15 16:01:48, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea cultivar Shitouqi chromosome A04.
CP030986.1:102313512-102313532
AGGATGAAATACAAAGAGTAAAATGATCGA102313512CCCACACAGCAAGAACTGATTTTACTATTATGTCTCAGGTTCCAACAAATC
Emmelina monodactyla genome assembly, chromosome: 4.
OU745304.1:2446137-2446157
TTTCTGAAAGCTTTCGCAGTAAAGGTACCA2446137CCCACACAGCAAGAACTGATTGACGGCAGAAATATCAACCTTAGCTCTTTG
Sequence 3261 from Patent EP2519097.
JB350849.1:704-724
GATTTGTTGGAACCTGAGACATAATAGTAA704AATCAGTTCTTGCTGTGTGGGCCACCTCAGTCACACATGAATTAAG
Sequence 3261 from patent US 9493785.
KH362760.1:704-724
GATTTGTTGGAACCTGAGACATAATAGTAA704AATCAGTTCTTGCTGTGTGGGCCACCTCAGTCACACATGAATTAAG
Sequence 3261 from Patent EP3056569.
LQ606410.1:704-724
GATTTGTTGGAACCTGAGACATAATAGTAA704AATCAGTTCTTGCTGTGTGGGCCACCTCAGTCACACATGAATTAAG
Sequence 3261 from patent US 10351873.
MO207982.1:704-724
GATTTGTTGGAACCTGAGACATAATAGTAA704AATCAGTTCTTGCTGTGTGGGCCACCTCAGTCACACATGAATTAAG
AS1RN5P1H02.ab1 Healthy Roots (RN) Arachis stenosperma cDNA 5', mRNA sequence.
EH043930.1:294-314
GATTTGTTGGAACCTGAGACATAATAGTAA294AATCAGTTCTTGCTGTGTGGGCCACCTCAGTCACACATGAATTAAG
Arachis stenosperma clone AS1RN5H02 microsatellite sequence.
DQ099062.1:262-282
GATTTGTTGGAACCTGAGACATAATAGTAA262AATCAGTTCTTGCTGTGTGGGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCACACAGCAAGAACTGATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCACACAGCAAGAACTGATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.129 | 0.120 | search_plus_done; http://172.18.8.135:50400/match?q=CCCACACAGCAAGAACTGATT&k=0&no_gap=0&offset=0&limit=50
0.489 | 0.361 | search_minus_done; http://172.18.8.135:50400/match?q=AATCAGTTCTTGCTGTGTGGG&k=0&no_gap=0&offset=0&limit=48
0.493 | 0.004 | cgi_end;

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