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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-12-17 04:41:37, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:6073753-6073776
AAAGAGAAGAAAGATGATTGAAAGAGGAAA6073753ATGTATAATTTTACTATTGGTGGGTGACAACTGACAAATATGAGAGAACATTTG
Luffa acutangula microsatellite CsWCT25 sequence.
KP640131.1:189-212
AAAATCAATTTTGTCCCCAAACTTAGCATG189ATGTATAATTTTACTATTGGTGGGACGGTTTGATTGA
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:6104908-6104931
AAAGAGAAGAAAGATGATTGAAAGAGGAAA6104908ATGTATAATTTTACTATTGGTGGGTGACAACTGACAAATATGAGAGAACATTTG
Cucumis melo genomic chromosome, chr_8.
LN713262.1:6104908-6104931
AAAGAGAAGAAAGATGATTGAAAGAGGAAA6104908ATGTATAATTTTACTATTGGTGGGTGACAACTGACAAATATGAGAGAACATTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCACCAATAGTAAAATTATACAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCACCAATAGTAAAATTATACAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.356 | 0.347 | search_plus_done; http://172.18.8.135:50800/match?q=CCCACCAATAGTAAAATTATACAT&k=0&no_gap=0&offset=0&limit=50
0.502 | 0.147 | search_minus_done; http://172.18.8.135:50800/match?q=ATGTATAATTTTACTATTGGTGGG&k=0&no_gap=0&offset=0&limit=50
0.505 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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