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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 14:58:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens chromosome 1 clone RP11-148B18, complete sequence.
AC097059.2:72582-72601
TTAAAGCCTCTTAGTATTGTTTCAAATGCC72582CCCACCCTTTTCTTCTTTTTAAGCGTGCTGGTTTTATAAACCGGGAACCT
Macaca fascicularis complete genome, chromosome chr1.
LT160000.1:204229888-204229907
ACTTTTCCTCCCTACTTGCTTCTTTTACTT204229888CCCACCCTTTTCTTCTTTTTCATCCCTTTTCCTCTCCCCTCTCTTTTCTT
Sciurus carolinensis genome assembly, chromosome: 13.
LR738603.1:72033465-72033484
GCTCAGAATGAATGACAGGCAGAGTGGATT72033465CCCACCCTTTTCTTCTTTTTGAATCATTTTTTAATAACCTGCACTAAGAT
Sciurus vulgaris genome assembly, chromosome: 14.
LR738625.1:76493030-76493049
GCTCAGAATGAATGACAGGCAGACTGGATT76493030CCCACCCTTTTCTTCTTTTTGAATCATTTTTTAATAACCTGCACTAAGAT
Onychomys torridus genome assembly, chromosome: 15.
LR877202.1:40620571-40620590
TAGCCTTGACCATGCTCTTGCCTTTCCCAA40620571CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Onychomys arenicola genome assembly, chromosome: 1.
OX460347.1:171304708-171304727
TTGCCCACTGAGCTATCCCTCATCTCCATA171304708CCCACCCTTTTCTTCTTTTTGAGACAAGGTCTTCCTGTCTAGCCAGCCTG
Onychomys arenicola genome assembly, chromosome: 15.
OX460361.1:40344394-40344413
TAGCCTTGACCATGCTCTTGCCTTTCCCAA40344394CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Onychomys leucogaster genome assembly, chromosome: 15.
OX460385.1:40685389-40685408
TAACCTTGACCATGCTCTTGCCTTTCCCAA40685389CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Onychomys leucogaster genome assembly, chromosome: 15.
OX460432.1:41128723-41128742
GTAACCTTGACCATGCTCTTGCTTTCCCAA41128723CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Onychomys arenicola genome assembly, chromosome: 1.
OX460442.1:163486606-163486625
TTGCCCACTGAGCTATCCCTCATCTCCATA163486606CCCACCCTTTTCTTCTTTTTGAGACAAGGTCTTCCTGTCTAGCCAACCTG
Onychomys arenicola genome assembly, chromosome: 15.
OX460456.1:42729164-42729183
TAGCCTTGACCATGCTCTTGCCTTTCCCAA42729164CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Onychomys torridus genome assembly, chromosome: 15.
OX460896.1:40620571-40620590
TAGCCTTGACCATGCTCTTGCCTTTCCCAA40620571CCCACCCTTTTCTTCTTTTTCATCTATCTCTGTTCAAAATACAAATTTTA
Muscardinus avellanarius genome assembly, chromosome: 4.
OY726560.1:17487475-17487494
TTAACATCCAGCTAGCTAGCGATTCCAGAC17487475CCCACCCTTTTCTTCTTTTTTCTTTAGTTGACAAGTCCAAAAGGATAAAC
Heterocephalus glaber genome assembly, chromosome: 3.
OZ001068.1:906467-906486
ACCACCACTGAGGCCACAGGCTCCTTCAGT906467CCCACCCTTTTCTTCTTTTTTCTTCTTTTCAATTTTGTTGACAAAAATGT
Heterocephalus glaber genome assembly, chromosome: 3.
OZ001111.1:103810-103829
ACCACCACTGAGGCCACAGGCTCCTTCAGT103810CCCACCCTTTTCTTCTTTTTTCTTCTTTTCAATTTTGTTGACAAAAATGT
Meles meles genome assembly, chromosome: 11.
OV277452.1:13334940-13334959
CTGTATTTGAAGACAGGGTCTTCCCCCCCC13334940CCCACCCTTTTCTTCTTTTTCTTTTTCTTTCTTTCTTTTTTTTTGAGACA
Erinaceus europaeus genome assembly, chromosome: 8.
OX485818.1:123287050-123287069
AAATCCACTGCCCCTGGCAGCTATTCCTCC123287050CCCACCCTTTTCTTCTTTTTTCTATTTTATTTGCTAGGGCAGAGAGAAAT
Eptesicus nilssonii genome assembly, chromosome: 5.
OX621284.1:30061878-30061897
GCTCCTCTTGCTCTTGGCAGGACATGTGTC30061878CCCACCCTTTTCTTCTTTTTTTAAAAAAAATATATTTTTATTGATTTCAG
Myotis daubentonii genome assembly, chromosome: 15.
OY725374.1:3695061-3695080
GCACCCAGCCCTGGTCCTGTCCTCCTCTGT3695061CCCACCCTTTTCTTCTTTTTTTTTTAAAAAAATATATTTTATTGATTTCA
Phocoena phocoena genome assembly, chromosome: 12.
OZ004769.1:25272186-25272205
GGGGGGGGGGGGGGGGGGGGTTCTCCCTTC25272186CCCACCCTTTTCTTCTTTTTCTTTTTTTTTTAACATCGTTATTGGAGTAT
Apteryx australis mantelli genome assembly, scaffold: scaffold132.
LK065216.1:5943985-5944004
AAATGATGCAACATGATAATCAGCACTTTC5943985CCCACCCTTTTCTTCTTTTTGTATACCATGGGCAATCATCTCTATTTTTT
Microcaecilia unicolor genome assembly, chromosome: 4.
LR594635.1:229013978-229013997
AGCCGCGCGTGTCCTGTCCTGGTTGGAGCC229013978CCCACCCTTTTCTTCTTTTTTTTTTTTTTTTGGGGGGGGAGGGTCGAAGG
Microcaecilia unicolor genome assembly, chromosome: 11.
LR594642.1:65625045-65625064
AGCCGCGCACGTCCTGTCCTGGTTGGAGCC65625045CCCACCCTTTTCTTCTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGCTTTG
Anas platyrhynchos genome assembly, chromosome: 9.
LS423619.1:11451316-11451335
CCCTTTTTTTTTCCCTTTTTTCCTCCTTTT11451316CCCACCCTTTTCTTCTTTTTTTCCCATTTTTCCCCTTTTTTCCCATTTTT
GR__Eb12E10.r GR__Eb Gossypium raimondii cDNA clone GR__Eb12E10 3', mRNA sequence.
CO127614.1:152-171
TACAGCAAGTTTCCACCTCCTTCATTCACC152CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTCTATATAATAAACAAC
GR__Eb43N12.f GR__Eb Gossypium raimondii cDNA clone GR__Eb43N12 5', mRNA sequence.
CO131509.1:161-180
TACAGCAAGTTTCCACCTCCTTCATTCACC161CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTCTATATAATAAACAAC
CS00-C3-704-092-D09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY733759.1:824-843
GTAACCACTAAAGTTTTTTTTTTTTACCCC824CCCACCCTTTTCTTCTTTTTTTTTTTTTTGGGGGCCTTCCTTTCAAATTT
G10_427264.82.S1104123329.anther-SP12274 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence.
JK702979.1:161-180
TACAGCAGGTTTCCACCTCCCTCATTTATC161CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTCTATATAATAAACAAC
H06_430853.90.S1104142857.anther-SP14682 Normalized cDNA library of anther of upland cotton cultivar CCRI36 Gossypium hirsutum cDNA 3', mRNA sequence.
JK703833.1:61-80
TACAGCAAGTTTCCACCTCCTTCATTCACC61CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTCTATATAATAAACAAC
Mus musculus molossinus DNA, clone:MSMg01-181D04.T7, genomic survey sequence.
AG374452.1:723-742
GTCTTTGTTGTCGCCCCCCCGCCCCCCCAC723CCCACCCTTTTCTTCTTTTTTTATAGANAATACTTGTGATTGGAGCGGCG
Mus musculus molossinus DNA, clone:MSMg01-437H04.TJ, genomic survey sequence.
AG528279.1:479-498
TTTCTCGCTATATTTTGCGTATTCTTGTCC479CCCACCCTTTTCTTCTTTTTTCCCTCACCTTTTTCCCCTCTCTTTTTCTT
Rattus norvegicus clone CH230-8A4, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC095509.6:4421-4440
TTATCTACATTCTATCTTCCTATACCATTC4421CCCACCCTTTTCTTCTTTTTATACTTAAGTTTTCATAGGACTAATTTGTA
Gossypium herbaceum isolate Zhongcao1 chromosome 1.
CP106687.1:116975360-116975379
CTACAGCAAGTTTCCACCTCCTCATTTATC116975360CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTATATAATAAACAACAA
Gossypium rotundifolium isolate GPK201 chromosome 1.
CP106722.1:188695723-188695742
AAGCAAGTTTCCACCTCCGTCATTTTTACC188695723CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCCCTATATAATAAACAAC
Microcos paniculata chromosome 3b.
CP131449.1:20064870-20064889
ATGTATAAATATATAACCAAAATCCATTGT20064870CCCACCCTTTTCTTCTTTTTTTTAATGGAGCCATGCAAGTCCAAAACGCA
Microcos paniculata chromosome 3b.
CP131449.1:25471904-25471923
TATATATATATATATAGATTTATCCATTGC25471904CCCACCCTTTTCTTCTTTTTTTTAATGGAGCCATACAAGTCCAAAACTCA
Microcos paniculata chromosome 8b.
CP131454.1:8107962-8107981
ATGTATAAAGATATAACCAAAAGACATTGT8107962CCCACCCTTTTCTTCTTTTTTTAATGGAGCCATGCAAGTGCAAAAGCCAT
Microcos paniculata chromosome 3a.
CP131458.1:20143152-20143171
ATGTATAAATATATAACCAAAATCCATTGT20143152CCCACCCTTTTCTTCTTTTTTTTAATGGAGCCATGCAAGTCCAAAACGCA
Microcos paniculata chromosome 3a.
CP131458.1:26222525-26222544
TATATATATATATATAGATTTATCCATTGC26222525CCCACCCTTTTCTTCTTTTTTTTAATGGAGCCATACAAGTCCAAAACTCA
Microcos paniculata chromosome 8a.
CP131463.1:6816075-6816094
ATGTATAAAGATATAACCAAAAGACATTGT6816075CCCACCCTTTTCTTCTTTTTTTAATGGAGCCATGCAAGTGCAAAAGCCAT
Gossypium hirsutum clone NBRI_TRANS-012 microsatellite sequence.
JX963682.1:3-22
TC3CCCACCCTTTTCTTCTTTTTCATTGCATCTCTCTCTATATAATAAACAAC
Solanum dulcamara genome assembly, chromosome: 2.
OX359253.1:67789726-67789745
ATACATATATTATACTTATACAATACTAAC67789726CCCACCCTTTTCTTCTTTTTTCTTTTCCACCTCCCAATCCCACCTAAACC
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:160082033-160082052
GGAATTGGCTAATTAGACTTTGGTCTACCA160082033CCCACCCTTTTCTTCTTTTTTTTTATTTTGTTGTTTTTTCCCATTGTATC
Ilex aquifolium genome assembly, chromosome: 4.
OX637394.1:19328917-19328936
AGAAAATGGATTATAATTCTTACCTTTGCA19328917CCCACCCTTTTCTTCTTTTTTTTTTTTTCTTCTTTCCTTCTACATCCCTT
Alnus glutinosa genome assembly, chromosome: 3.
OY340900.1:35816759-35816778
TCTCTCTCTCTCCCCCCCCCCCCCCCCCCC35816759CCCACCCTTTTCTTCTTTTTTTTTTCTTTTTTTTTTCTTTTTTTTTTTTC
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737421.1:418571550-418571569
ACAGGCACGCCGGCCATGATCATCAACCCA418571550CCCACCCTTTTCTTCTTTTTTCTTGCCCGTCTTTTTGTACTGTATATGTA
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737432.1:436893014-436893033
CCGGCCATGATCCGATCATCAACCCACCCA436893014CCCACCCTTTTCTTCTTTTTTCTTGCCCGTCTTTTCTACTGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_1.
OY737523.1:403195127-403195146
GCACGCCGGCCATGATCATCAACCCACCCA403195127CCCACCCTTTTCTTCTTTTTTATTGGCCTGTCTTTTGTATGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737530.1:425360804-425360823
GCACGCCGGCCATGATCATCAACCCACCCA425360804CCCACCCTTTTCTTCTTTTTTATTGCCCGTCTTTTGTACTGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737537.1:418067683-418067702
GCACGCCGGCCATGATCATCAACCCACCCA418067683CCCACCCTTTTCTTCTTTTTTATTGGCCTGTCTTTTGTATGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737544.1:398625183-398625202
GCACGCCGGCCATGATCATCAACCCACCCA398625183CCCACCCTTTTCTTCTTTTTTATTGGCCTGTCTTTTGTATGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737623.1:418173044-418173063
CCGGCCATGATCCGATCATCAACCCACCCA418173044CCCACCCTTTTCTTCTTTTTTCTTGCCCGTCTTTTCTACTGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_3.
OY737630.1:313020438-313020457
GCACGCCGGCCATGATCATCAACCCACCCA313020438CCCACCCTTTTCTTCTTTTTTATTGGCCTGTCTTTTGTATGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_4.
OY737637.1:395977876-395977895
GCACGCCGGCCATGATCATCAACCCACCCA395977876CCCACCCTTTTCTTCTTTTTTATTGGCCTGTCTTTTGTATGTATGTAATT
Hordeum bulbosum genome assembly, chromosome: 6H_2.
OY737878.1:411385080-411385099
ACAGGCACGCCGGCCATGATCATCAACCCA411385080CCCACCCTTTTCTTCTTTTTTCTTGCCCGTCTTTTCTACTGTATGTAATT
Galeopsis tetrahit genome assembly, chromosome: 1.
OY776119.1:37479255-37479274
CCCTTAAAATCCTCATTTCCCTTCATCTTC37479255CCCACCCTTTTCTTCTTTTTTCAATAAAAAATCCTAAAACCCTTTTCTTC
Bacillus albus strain SXL388 chromosome, complete genome.
CP128152.1:5168916-5168935
TGCAAACAAATAATACTCGTTTCATCTAAA5168916CCCACCCTTTTCTTCTTTTTCCTACTTTTTATCATAGCGTAAATTCAAAT
3_Tms_b3v08.
OB797901.1:10476-10495
AATATCTTTAAGGCTAAACCCACCCCTAAA10476CCCACCCTTTTCTTCTTTTTTTTTTCCAAAAACAATCAATTTGTTTGTGG
Cerceris rybyensis genome assembly, chromosome: 9.
OU342797.1:612059-612078
GCTGCATTTGATTTCCCGCTCGCTCTCGCT612059CCCACCCTTTTCTTCTTTTTTTTTGCAACAATATCGGCCGCTTTGCGCCA
Platycheirus albimanus genome assembly, chromosome: 1.
OU696696.1:247409185-247409204
AAAACCGGAGCAATGTCAAAAATTTGCAGT247409185CCCACCCTTTTCTTCTTTTTCCATTTTTTGGCAAAAAAAATTGACATACA
Platycheirus albimanus genome assembly, chromosome: 1.
OU696696.1:247424632-247424651
AAAACCGGAGCAATGTCAAAAATTTGCAGT247424632CCCACCCTTTTCTTCTTTTTCCATTTTTTGGCAAAAAAAATTGACATACA
Platycnemis pennipes genome assembly, chromosome: 7.
OW121853.1:76063764-76063783
CGGTGTGTCGTTCGGCTCATTTCTTCTTCC76063764CCCACCCTTTTCTTCTTTTTTCTCCGAGCAAAGGAATTTTCGCGGGAGTG
Meconema thalassinum genome assembly, chromosome: 4.
OX336392.1:15560735-15560754
GCGCCCCTCATCATGGACCAATTTTTCAAT15560735CCCACCCTTTTCTTCTTTTTCCGTTTTTGTTTCGTCTCCTCCGTAGAAAT
Mimachlamys varia genome assembly, chromosome: 5.
OX392531.1:41273044-41273063
AATTTGACTCCTGATTGGTCCATATGAGCA41273044CCCACCCTTTTCTTCTTTTTTTTTCTTGCACCCTGATCGTGAGCACTTAT
Andrena trimmerana genome assembly, chromosome: 1.
OX578059.1:105649832-105649851
TGTATAAGCGCCTCCTCCGAATAGATCAAA105649832CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Andrena trimmerana genome assembly, chromosome: 1.
OX578059.1:119177159-119177178
TGTATAAGCGCCTCCTCCGAATAGATCAAA119177159CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Andrena trimmerana genome assembly, chromosome: 2.
OX578060.1:20403606-20403625
TGTATAAGCGCCTCCTCCGAATAGATCAAA20403606CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Andrena trimmerana genome assembly, chromosome: 2.
OX578060.1:45582339-45582358
TGTATAAGCGCCTCCTCCGAATAGATCAAA45582339CCCACCCTTTTCTTCTTTTTTAGGAAGACCCATTATCTATTACACTAGAT
Andrena carantonica genome assembly, chromosome: 2.
OX731549.1:87097562-87097581
TGTATAAGCGCCTCCTCCGAATAGATCAAA87097562CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Andrena carantonica genome assembly, chromosome: 3.
OX731550.1:13671202-13671221
TGTATAAGCGCCTCCTCCGAATAGATCAAA13671202CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Andrena carantonica genome assembly, chromosome: 3.
OX731550.1:46258721-46258740
TGTATAAGCGCCTCCTCCGAATAGATCAAA46258721CCCACCCTTTTCTTCTTTTTCAGGAAGACCCATTATCTATTACACTAGAT
Mechanitis messenoides genome assembly, chromosome: 5.
OY365764.1:11695482-11695501
TTAGCATTAACATGGTCTATTCTGTTGTAA11695482CCCACCCTTTTCTTCTTTTTTTTCCGTTTGAAAAACCTGATACGGGTACC
Melanotus villosus genome assembly, chromosome: 2.
OY720419.1:44671979-44671998
TATTTTCTTCCATTCTGGAAATGTCTTCAT44671979CCCACCCTTTTCTTCTTTTTTGGGTCTAATCATTTAAGGGTTGAATTTGG
Maratus michaelseni genome assembly, chromosome: 6.
OZ007592.1:150336435-150336454
TTAAACAATATACTAAAACTTCTTCTCACC150336435CCCACCCTTTTCTTCTTTTTTTTTTGAACAAAACTGAAGATCAACTATAA
Sepia lycidas genome assembly, chromosome: 7.
OZ010577.1:30806040-30806059
ATCAGAATAAAGCCTACAAACCTTATAACC30806040CCCACCCTTTTCTTCTTTTTCATAAAAAGAAGTTGTATTTTGCTTTTAAA
Andrena marginata genome assembly, chromosome: 6.
OZ010664.1:4178689-4178708
TGTTTAAGCGCCTCCTCCGAAAAGATCAAG4178689CCCACCCTTTTCTTCTTTTTTCAGGAAGACCCGTTATCTATTACGCTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCACCCTTTTCTTCTTTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCACCCTTTTCTTCTTTTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.584 | 0.575 | search_plus_done; http://172.18.8.135:50400/match?q=CCCACCCTTTTCTTCTTTTT&k=0&no_gap=0&offset=0&limit=50
0.759 | 0.175 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAAGAAGAAAAGGGTGGG&k=0&no_gap=0&offset=0&limit=0
0.759 | 0.000 | cgi_end;

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