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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:23:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Acomys percivali genome assembly, chromosome: 1.
OU015742.1:131393930-131393949
ACCCACCACCACCCACCACCACCACTATCA131393930CCCACTACCACTACCACCCACCACCACTACCAACCCATCACCACCTACCA
Apodemus sylvaticus genome assembly, chromosome: 1.
OX359297.1:116333422-116333441
ACCACCACCACCACCACCACCCCACCACAC116333422CCCACTACCACTACCACCCACCACCCCACTACCAACCTCCCACCACCCCA
Peromyscus eremicus genome assembly, chromosome: 11.
OX460405.1:25187261-25187280
CACTGCCACCACCCACTGCCACCACCACCA25187261CCCACTACCACTACCACCCACTGCCACCACCACCACCACCACCCACTACC
Canis lupus familiaris breed Labrador retriever chromosome 11a.
CP050600.1:23117293-23117312
ACTGGAGCCCTCCCTCCCCTCTAGGAATCC23117293CCCACTACCACTACCACCCACAGGATTCTTTCAGCTCAGAGACTGTTCCC
Canis lupus familiaris breed Labrador retriever chromosome 11b.
CP050630.1:23110112-23110131
ACTGGAGCCCTCCCTCCCCTCTAGGAATCC23110112CCCACTACCACTACCACCCACAGGATTCTTTCAGCTCAGAGACTGTTCCC
Canis lupus genome assembly, chromosome: 11.
HG994391.1:24786187-24786206
ACTGGAGCCCTCCCTCCCCTCTAGGAATCC24786187CCCACTACCACTACCACCCACAGGATTCTTTCAGCTCAGAGACTGTTCCC
Pipistrellus pipistrellus genome assembly, chromosome: 3.
LR862358.1:78451491-78451510
TTTATTTGTCATCACAAGTCACTCATTGTC78451491CCCACTACCACTACCACCCAAAAGCAGTAGGGACAGATCACTGTCTCATT
Martes martes genome assembly, chromosome: 9.
OY734071.1:57253378-57253397
ACCATAACCCCTGGGAAGCATCCCCCTTTC57253378CCCACTACCACTACCACCCAGAATTAACCCCTGCTCCTGAGAAGGTGAAG
Salmo trutta genome assembly, chromosome: 2.
LR584445.1:28004463-28004482
AGTAATTCTGTAATGTGTGCATAGATGGAT28004463CCCACTACCACTACCACCCAAGCCATAGACTGTTCACTCTGCTACCGTCC
Microcaecilia unicolor genome assembly, chromosome: 3.
LR594634.1:462751849-462751868
GATTTAAACTGCAAGTATTATAACACTCAC462751849CCCACTACCACTACCACCCACCCACCCACCCACAAAGAAAGCTGAAATAC
Microcaecilia unicolor genome assembly, chromosome: 3.
LR594634.1:463036867-463036886
GATTTAAACTGCAAGTATTATAACACTCAC463036867CCCACTACCACTACCACCCACCCACCCACCCACCCACCCACAAAGAAAGC
Telmatherina bonti genome assembly, chromosome: 13.
OW121833.1:9560007-9560026
AGCAGTGAGATTTGTCAACACACTGCCTCC9560007CCCACTACCACTACCACCCACATGGAGTAAATAACGGTACCCTGCCACCT
POX1_E2 Sugar Beet peroxide germination cDNA library (subtracted) Beta vulgaris cDNA 5' similar to Arabidopsis thaliana unknown protein (AC003672), mRNA sequence.
BI643077.1:430-449
TCCAGAACTGCCACCTCCCATGTACCCACT430CCCACTACCACTACCACCCATACCACGGCCAGAATACAGTGATGAGTAAG
E012404-024-024-C23-T7 MPIZ-ADIS-024-developing root Beta vulgaris cDNA clone 024-024-C23 3-PRIME, mRNA sequence.
BQ594636.1:431-450
TCCAGAACTGCCACCTTCCATGTACCCACT431CCCACTACCACTACCACCCATACCACGGGCAG
KS26061H03 KS26 Capsicum annuum cDNA, mRNA sequence.
GD135286.1:14-33
GCACGAGGCCACC14CCCACTACCACTACCACCCAACCACCCTCATCCGCCCAAACCATTCACTA
TSA: Capsicum annuum EJ_MegaContig_22639, mRNA sequence.
JW133208.1:7-26
CCCACC7CCCACTACCACTACCACCCAACCACCCTCATCCGCCCAAACCATTCACTA
Papaver somniferum cultivar Roxanne chromosome 11.
CP048212.1:164533823-164533842
TCTCCATTCCAGTCTCGTACTTCTCCTACT164533823CCCACTACCACTACCACCCAACCATCTTCTTCCCAAACCCCACCCACCAC
Papaver somniferum cultivar Roxanne chromosome 1.
CP048213.1:150849880-150849899
TCTCCATACTAATCTCGTATTTATCCTACT150849880CCCACTACCACTACCACCCAACCATCTTCTTCCCAAACCCCACCTGCCAC
Papaver somniferum cultivar Roxanne chromosome 4.
CP048216.1:24226402-24226421
TCTCCATTCCAGTCCCGTCCTTCTCCTACT24226402CCCACTACCACTACCACCCAACCATCTTCTTCCCAAACTCTACCTACCAC
Armillaria ostoyae strain C18/9 genome assembly, chromosome: LG11.
LR732085.1:2442313-2442332
GGTGCGACGTCTCATCGGGGTGGGGTCCAA2442313CCCACTACCACTACCACCCAGACCCTTCTTGGGCTTGCAGGTACACGTAA
Buxus sempervirens genome assembly, chromosome: 4.
OX387185.1:37447343-37447362
CCACCAAGACACCCCCACCATCACCACTCA37447343CCCACTACCACTACCACCCACCATATATCCACTACCGCCATCCACCCTTA
Salicornia ramosissima genome assembly, chromosome: 2.
OX596233.1:7302838-7302857
CTCACCACCCAGAAACCAATCTCACTCACA7302838CCCACTACCACTACCACCCATGAACCCAACTCAACATCCAGAAAACCCAT
Volucella inflata genome assembly, chromosome: 5.
OV743720.1:38779737-38779756
TATATGAGGTTCGTGTTCACTCATCCACCA38779737CCCACTACCACTACCACCCACTACCACTACCACCCACTACCACTACCACC
Volucella inflata genome assembly, chromosome: 5.
OV743720.1:38779753-38779772
TCACTCATCCACCACCCACTACCACTACCA38779753CCCACTACCACTACCACCCACTACCACTACCACCCACTACTACTACCACC
Volucella inflata genome assembly, chromosome: 5.
OV743720.1:38779769-38779788
CACTACCACTACCACCCACTACCACTACCA38779769CCCACTACCACTACCACCCACTACTACTACCACCCACTATCCACTACCCA
Buathra laborator genome assembly, chromosome: 8.
OW203899.1:16664978-16664997
TCGTACCGAGTGAACAAGGACCTCGGGATA16664978CCCACTACCACTACCACCCACTACCACTACCACTACCGCCCTGTGAACGA
Chalcosyrphus nemorum genome assembly, chromosome: 3.
OX454334.1:55981233-55981252
CACGGCATATAGACACATCCATCTACTACC55981233CCCACTACCACTACCACCCATGAGGAGCAGCGTTCCATTTTCAGTTTAAT
Perizoma flavofasciatum genome assembly, chromosome: 16.
OY292435.1:7177967-7177986
AACTACGAGGTACTCGTAGTACGTCAGACA7177967CCCACTACCACTACCACCCATAAATGCGAAAATCTGTGAGGATGGATGTT
Acomys percivali genome assembly, chromosome: 11.
OU015752.1:69017018-69017037
TGAAACCAGAATGCACAGTCCAAGTCCCAC69017018TGGGTGGTAGTGGTAGTGGGTTTTTGTTTGGTTGGTTGGTTGGTTTTGTT
Apodemus sylvaticus genome assembly, chromosome: 11.
OX359308.1:71618450-71618469
CAGCTTACACAATGAAATTTTTTTCTCTGT71618450TGGGTGGTAGTGGTAGTGGGGTTTCAAGGGTGGTGGAGGGCCAATAGGAG
Apodemus sylvaticus genome assembly, chromosome: 18.
OX359315.1:26792975-26792994
GTATGAGTTTTCTCTCTCAATTAAGCTTTT26792975TGGGTGGTAGTGGTAGTGGGGTGACCAGTATAGCTTGAAACAAAGCAAAG
Canis lupus familiaris breed Labrador retriever chromosome 15a.
CP050569.1:56237238-56237257
ATACTAAAGGCAGGATCAGCATGATTGTTT56237238TGGGTGGTAGTGGTAGTGGGTTTGTGAGGAGGGATTTACTGATCTACCAG
Canis lupus familiaris breed Labrador retriever chromosome 15b.
CP050620.1:56249385-56249404
ATACTAAAGGCAGGATCAGCATGATTGTTT56249385TGGGTGGTAGTGGTAGTGGGTTTGTGAGGAGGGATTTACTGATCTACCAG
Canis lupus genome assembly, chromosome: 15.
HG994395.1:57719563-57719582
ATACTAAAGGCAGGATCAGCATGATTGTTT57719563TGGGTGGTAGTGGTAGTGGGTTTGTGAGGAGGGATTTACTGATCTACCAG
Meles meles genome assembly, chromosome: 13.
OV277454.1:31350831-31350850
TACAGAGAAACCCAGAGTAGTTGGAGTTCC31350831TGGGTGGTAGTGGTAGTGGGATGAGGTCTCTTGAGGTTTGGGCCCCAGAG
PF_T3_70R_D03_03SEP2003_025 Opium poppy root cDNA library Papaver somniferum cDNA, mRNA sequence.
FG604802.1:531-550
GTGGCAGGTGGGGTTTGGGAAGAAGATGGT531TGGGTGGTAGTGGTAGTGGGAGTAGGAAAATACGAGATTGGTATGGATAT
TSA: Oncorhynchus mykiss 115132.Onmycontig, mRNA sequence.
EZ878466.1:1212-1231
TCAACAAGAAGAGACTTGTCTGTTGGTTTA1212TGGGTGGTAGTGGTAGTGGGTGGTGTGTGTGTACATTACTAGTGTACATT
TSA: Beta vulgaris Locus_5607_Transcript_1/10_Confidence_0.289_Length_1975 mRNA sequence.
JP495866.1:1470-1489
CTTACTCATCACTGTATTCTGGCCGTGGTA1470TGGGTGGTAGTGGTAGTGGGAGTGGGTACATGGGAGGTGGCAGTTCTGGA
TSA: Beta vulgaris Locus_5607_Transcript_2/10_Confidence_0.421_Length_2958 mRNA sequence.
JP495867.1:2453-2472
CTTACTCATCACTGTATTCTGGCCGTGGTA2453TGGGTGGTAGTGGTAGTGGGAGTGGGTACATGGGAGGTGGCAGTTCTGGA
TSA: Beta vulgaris Locus_5607_Transcript_10/10_Confidence_0.474_Length_2982 mRNA sequence.
JP495872.1:2477-2496
CTTACTCATCACTGTATTCTGGCCGTGGTA2477TGGGTGGTAGTGGTAGTGGGAGTGGGTACATGGGAGGTGGCAGTTCTGGA
tigr-gss-dog-17000359431575 Dog Library Canis lupus familiaris genomic, genomic survey sequence.
CE089771.1:182-201
ATACTAAAGGCAGGATCAGCATGATTGTTT182TGGGTGGTAGTGGTAGTGGGGTTTGTGAGGAGGGATTTACTGATCTACCA
Rattus norvegicus clone CH230-6P14, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC095414.6:219071-219090
ACTGTAAATGCACAGAGGAGGGAAGGTTCA219071TGGGTGGTAGTGGTAGTGGGAGACAACTGTTCCGTTCTGACTGTTCCCTC
Rattus norvegicus clone CH230-4I12, WORKING DRAFT SEQUENCE.
AC125728.4:217266-217285
ACTGTAAATGCACAGAGGAGGGAAGGTTCA217266TGGGTGGTAGTGGTAGTGGGAGACAACTGTTCCGTTCTGACTGTTCCCTC
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:224628198-224628217
TAGTGAATGGTTTGGGCGGATGAGGGTGGT224628198TGGGTGGTAGTGGTAGTGGGGGTGGGGGTGGGAGTGGGGGTGGGTGAGAA
Papaver somniferum cultivar Roxanne chromosome 1.
CP048213.1:77967210-77967229
GTGGTAGGTAGGGTTTGGGAAGAAGATGGT77967210TGGGTGGTAGTGGTAGTGGGAGTAGGAGAAGTACGGGACTGGAATGGAGA
Papaver somniferum cultivar Roxanne chromosome 1.
CP048213.1:210017934-210017953
GTGGTAGGTGGGGTTTGGGAAGAAGATGGT210017934TGGGTGGTAGTGGTAGTGGGAGTAGGAGATATACGAGATTGGTATGGAGA
Papaver somniferum cultivar Roxanne chromosome 8.
CP048220.1:103839971-103839990
GTGGCAGGTGGGGTTTGGGAAGAAGATGGT103839971TGGGTGGTAGTGGTAGTGGGAGTAGGAAAATACGAGATTGGTATGGATAT
Papaver somniferum cultivar Roxanne chromosome 9.
CP048221.1:135955882-135955901
GTGGCAGGTGGGGTTTGGGAAGAATATGGT135955882TGGGTGGTAGTGGTAGTGGGAGTAGGAGAAATACGAGATTGGTATGGAGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:229436096-229436115
TAGTGAATGGTTTGGGCGGATGAGGGTGGT229436096TGGGTGGTAGTGGTAGTGGGGGTGGGGGTGGGAGTGGGGGTGGGTGAGAA
Chrysanthemum makinoi genome assembly, chromosome: 5.
OU343221.1:343475016-343475035
GTGAGGGTGGTGGGGTATGCAGTGTAGTGG343475016TGGGTGGTAGTGGTAGTGGGGGTGGTGGGTAGGTTTGTAGTAAGTGTGGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:9407703-9407722
CTTACTCATCACTGTATTCTGGCCGTGGTA9407703TGGGTGGTAGTGGTAGTGGGAGTGGGTACATGGGAGGTGGCAGTTCTGGA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392556.1:9552898-9552917
CTTACTCATCACTGTATTCTGGCCGTGGTA9552898TGGGTGGTAGTGGTAGTGGGAGTGGGTACATGGGAGGTGGCAGTTCTGGA
Trifolium dubium genome assembly, chromosome: 8.
OX638069.1:11600589-11600608
TTGGAGATTGTAACAGTTGGTATGGTGGTG11600589TGGGTGGTAGTGGTAGTGGGATTGGTAGAGATAATGGGAAGTGGAATATG
Piscicola geometra genome assembly, chromosome: 1.
OX030955.1:637402-637421
GAGTGGAGGTGGTGGTGGTAGTGATCGTGG637402TGGGTGGTAGTGGTAGTGGGATGATGAGTGTTGGTGGTGGGATGATGAGT
Piscicola geometra genome assembly, chromosome: 5.
OX030959.1:8134197-8134216
TGATTGGGTGGTTGTGGGTGGTAATGGTAG8134197TGGGTGGTAGTGGTAGTGGGTGGGTAAGTGAGTGGTGATGGTTGTAGTTT
Episyrphus balteatus genome assembly, chromosome: 1.
OX244017.1:50099560-50099579
GGCCGAATGTTATTCGGGGGGGTTGGTTGA50099560TGGGTGGTAGTGGTAGTGGGTGGATGTGGTATTGGGTGGTGTACTATTGG
Cosmia pyralina genome assembly, chromosome: 28.
OX276369.1:15767767-15767786
CAACTAGTATGGCCGTAGTGGTAGTGGTAG15767767TGGGTGGTAGTGGTAGTGGGCCGTTACCACTGAGACACCACGCTCAAAAC
Blera fallax genome assembly, chromosome: 1.
OX337244.1:41395788-41395807
GAAGTGGTTGTAGCACGAAACGTAGCCTAA41395788TGGGTGGTAGTGGTAGTGGGTGCTATTTAGACAAGGCAATGCCAACTACA
Acronicta leporina genome assembly, chromosome: 18.
OX366529.1:6265599-6265618
TATTACGAGTGGGATCACGTCGGTAGTGCG6265599TGGGTGGTAGTGGTAGTGGGTGGGTTACATACCGGCAACGCCATGATCAA
Eudonia truncicolella genome assembly, chromosome: 24.
OX438849.1:5762057-5762076
GGGTAGGTAGGTAGGTGGGTGGCGTGGTAG5762057TGGGTGGTAGTGGTAGTGGGTAGTATTAAAGGCTTGGACGTACCTATCTG
Azorinus chamasolen genome assembly, chromosome: 15.
OY755249.1:41362478-41362497
TGGTGGTATTAGTAGTGGTTTGATAGTGGG41362478TGGGTGGTAGTGGTAGTGGGTTGGTAGTAGTAGGGTGGTAATGGTAGAGG
Ectropis crepuscularia genome assembly, chromosome: 6.
OY856344.1:29632425-29632444
CGGATTTTGGGAATATCCACAGTGTACCTA29632425TGGGTGGTAGTGGTAGTGGGCCGACTTACGACTTGTCCTGTAGTGGAAAG
Maratus speciosus genome assembly, chromosome: 12.
OZ010799.1:155027381-155027400
TTTCCGGGCCTGCTTTTACCTGGGATTCTC155027381TGGGTGGTAGTGGTAGTGGGTGTTCTTTTCCGCCTGGACATAAGTTCCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCACTACCACTACCACCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCACTACCACTACCACCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.359 | search_plus_done; http://172.18.8.135:50400/match?q=CCCACTACCACTACCACCCA&k=0&no_gap=0&offset=0&limit=50
0.638 | 0.270 | search_minus_done; http://172.18.8.135:50400/match?q=TGGGTGGTAGTGGTAGTGGG&k=0&no_gap=0&offset=0&limit=22
0.661 | 0.023 | cgi_end;

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