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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:00:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-60612 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30c16 5', mRNA sequence.
DV711745.1:207-229
GCAAGGGTTTTGCAATGACTACGTGTACAG207GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGTTCTACTTTTG
CC-F01_001_G18 Cherry of different development stage Coffea canephora cDNA clone CC-F01_001_G18, mRNA sequence.
EE195592.1:179-201
GCAAGGGTTTTGCAATGACTACGTGTACAG179GATCAGTACCGCGGAGGAGTGGGCGGAACTGCNNNCAAGTGGNNCTACTTTTG
CC-F01_007_B09 Cherry of different development stage Coffea canephora cDNA clone CC-F01_007_B09, mRNA sequence.
EE196941.1:181-203
GCAAGGGTTTTGCAATGACTACGTGTACAG181GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGTTCTACTTTTG
TransId-82481 CACAT36FR28 Coffea arabica cDNA clone CACAT36FR28_Q1_08_M11_173.F similar to Symbol: None | expressed protein | chr4:819957-821484 REVERSE | Aliases: None, mRNA sequence.
GR984173.1:216-238
GCAAGGGTTTTGCAATGACTACGTGTACAG216GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
TransId-214469 CACATN1 Coffea arabica cDNA clone CACATN1-4H41TV similar to Hypothetical protein - Medicago truncatula (Barrel medic), mRNA sequence.
GR999636.1:210-232
GCAAGGGTTTTGCAATGACTACGTGTACAG210GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
TransId-235417 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEX667TV similar to Hypothetical protein - Medicago truncatula (Barrel medic), mRNA sequence.
GT007537.1:210-232
GCAAGGGTTTTGCAATGACTACGTGTACAG210GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
TransId-238050 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEY236TV similar to Hypothetical protein - Medicago truncatula (Barrel medic), mRNA sequence.
GT008492.1:231-253
GCAAGGGTTTCGCAATGACTACGTGTACAG231GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
TransId-274198 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_62-G04-PAL17d similar to Hypothetical protein - Medicago truncatula (Barrel medic), mRNA sequence.
GT018453.1:224-246
GCAAGGGTTTTGCAATGACTACGTGTACAG224GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
CA00-XX-CL2-117-E06-JF.F Coffea arabica CL2 Coffea arabica cDNA clone CA00-XX-CL2-117-E06-JF, mRNA sequence.
GT678970.1:84-106
GCAAGGGTTTTGCAATGACTACGTGTACAG84GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
CA00-XX-BP1-067-H09-CE.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-067-H09-CE, mRNA sequence.
GW436147.1:35-57
GCAAGGGTTTTGCAATGACTACGTGTACAG35GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG
CA00-XX-EA1-065-H10-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-065-H10-EC, mRNA sequence.
GW446148.1:204-226
GCAAGGGTTTTGCAATGACTACGTGTACAG204GATCAGTACCGCGGAGGAGTGGGCGGAACTGCAGACAAGTGGATCTACTTTTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCACTCCTCCGCGGTACTGATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCACTCCTCCGCGGTACTGATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.145 | search_plus_done; http://172.18.8.135:50400/match?q=CCCACTCCTCCGCGGTACTGATC&k=0&no_gap=0&offset=0&limit=50
1.302 | 1.148 | search_minus_done; http://172.18.8.135:50400/match?q=GATCAGTACCGCGGAGGAGTGGG&k=0&no_gap=0&offset=0&limit=50
1.309 | 0.008 | cgi_end;

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