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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 13:08:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-8321 Pericarp Coffea canephora cDNA clone cccp19m18 5', mRNA sequence.
DV672615.1:81-104
CCTCTCCTCTCACTTTATCCTCAATTTTAT81CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CGN-28810 Leaf Coffea canephora cDNA clone cccl3d19 5', mRNA sequence.
DV686975.1:90-113
CCTCTCCTCTCACTTTATCCTCAATTTTAT90CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CGN-33635 Leaf Coffea canephora cDNA clone cccl24j8 5', mRNA sequence.
DV690296.1:81-104
CCTCTCCTCTCACTTTATCCACAATTTTAT81CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CGN-33946 Leaf Coffea canephora cDNA clone cccl18f2 5', mRNA sequence.
DV690527.1:90-113
CCTCTCCTCTCACTTTATCCTCAATTTTAT90CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CGN-41780 Leaf Coffea canephora cDNA clone cccl30k12 5', mRNA sequence.
DV696562.1:76-99
CCTCTCCTCTCACTTTATCCTTAAAATTAT76CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CGN-41972 Leaf Coffea canephora cDNA clone cccl27p8 5', mRNA sequence.
DV696721.1:65-88
CCTCTCCTCTCACTTTATCCTCAATTTTAT65CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CGN-42475 Leaf Coffea canephora cDNA clone cccl30h6 5', mRNA sequence.
DV697133.1:65-88
CCTCTCCTCTCACTTCCTTCAAAATTTTAT65CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
CC-L01_006_B01 Coffea young leaves Coffea canephora cDNA clone CC-L01_006_B01, mRNA sequence.
EE192149.1:55-78
CCTCTCCTCTCACTTTATCCTCAATTTTAT55CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_007_H02 Coffea young leaves Coffea canephora cDNA clone CC-L01_007_H02, mRNA sequence.
EE192276.1:135-158
CCTCTCCTCTCACTTTATCCTCAATTTTAT135CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_023_F02 Coffea young leaves Coffea canephora cDNA clone CC-L01_023_F02, mRNA sequence.
EE193459.1:65-88
CCTCTCCTCTCACTTTATCCTCAATTTTAT65CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_034_A03 Coffea young leaves Coffea canephora cDNA clone CC-L01_034_A03, mRNA sequence.
EE194182.1:88-111
CCTCTCCTCTCACTTTATCCTCAATTTTAT88CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_049_H08 Coffea young leaves Coffea canephora cDNA clone CC-L01_049_H08, mRNA sequence.
EE194962.1:90-113
CCTCTCCTCTCACTTTATCCTCAATTTTAT90CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_049_H10 Coffea young leaves Coffea canephora cDNA clone CC-L01_049_H10, mRNA sequence.
EE194964.1:90-113
CCTCTCCTCTCACTTTATCCTCAATTTTAT90CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_050_E04 Coffea young leaves Coffea canephora cDNA clone CC-L01_050_E04, mRNA sequence.
EE194985.1:85-108
CCTCTCCTCTCACTTTATCCTCAATTTTAT85CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC-L01_050_F01 Coffea young leaves Coffea canephora cDNA clone CC-L01_050_F01, mRNA sequence.
EE194989.1:91-114
CCTCTCCTCTCACTTTATCCTCAATTTTAT91CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
TransId-80782 CACAT36FLBUD Coffea arabica cDNA clone CACAT36FLBUD_Q3_10_D05_068.F similar to Symbol: None | ribosomal protein L1 family protein, ribosomal protein L1, S.oleracea, EMBL:SORPL1 | chr3:23
GR982900.1:67-90
CCTCTCCTCTCACTTTATCCTCAATTTTAT67CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC00-XX-SH3-063-B10-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-063-B10-EM, mRNA sequence.
GT646168.1:64-87
CCTCTCCTCTCACTTTATCCTCAATTTTAT64CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC00-XX-SH3-033-B10-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-033-B10-EM, mRNA sequence.
GT646169.1:87-110
CCTCTCCTCTCACTTTATCCTCAATTTTAT87CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC00-XX-SH3-063-E02-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-063-E02-EM, mRNA sequence.
GT646170.1:64-87
CCTCTCCTCTCACTTTATCCTCAATTTTAT64CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CC00-XX-SH3-053-F03-EM.F Coffea canephora SH3 Coffea canephora cDNA clone CC00-XX-SH3-053-F03-EM, mRNA sequence.
GT649764.1:90-113
CCTCTCCTCTCACTTTATCCTCAATTTTAT90CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CA00-XX-LV8-098-E01-CE.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-098-E01-CE, mRNA sequence.
GT699009.1:54-77
CCTCTCCTCTCACTTTATCCTCAATTTTAT54CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CA00-XX-LV8-097-C09-UT.F Coffea arabica LV8 Coffea arabica cDNA clone CA00-XX-LV8-097-C09-UT, mRNA sequence.
GT699010.1:83-106
CCTCTCCTCTCACTTTATCCTCAATTTTAT83CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CA00-XX-FB4-025-F08-EQ.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-025-F08-EQ, mRNA sequence.
GT712847.1:96-119
CCTCTCCTCTCACTTTATCCTCAATTTTAT96CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CA00-XX-FB4-012-C06-QH.F Coffea arabica FB4 Coffea arabica cDNA clone CA00-XX-FB4-012-C06-QH, mRNA sequence.
GT712848.1:107-130
CCTCTCCTCTCACTTTATCCTCAATTTTAT107CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
CA00-XX-CS1-061-H06-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-061-H06-AC, mRNA sequence.
GT723810.1:92-115
CCTCTCCTCTCACTTTATCCTCAATTTTAT92CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
Coffea canephora x Coffea congensis microsatellite CofEST-SSR12 sequence.
AY705505.1:104-127
CCTCTCCTCTCACTTTATCCTCAATTTTAT104CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
Coffea congensis clone C19_12_01 microsatellite sequence.
DQ655760.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
Coffea congensis clone C19_12_02 microsatellite sequence.
DQ655761.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
Coffea liberica var. dewevrei clone C4_12_02 microsatellite sequence.
DQ655762.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
Coffea liberica clone C5_12_01 microsatellite sequence.
DQ655763.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
Coffea abeokutae clone C6_12_02 microsatellite sequence.
DQ655764.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT
Coffea liberica var. dewevrei clone C7_12_01 microsatellite sequence.
DQ655765.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCTT
Coffea liberica clone C12_12_01 microsatellite sequence.
DQ655766.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCGTCTTCTTCTTCTTCTTCTTCTT
Coffea liberica clone C12_12_02 microsatellite sequence.
DQ655767.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCGTCTTCTTCTTCTTCTTCATTAA
Coffea liberica var. dewevrei clone C13_12_01 microsatellite sequence.
DQ655768.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCGTCTTCTTCTTCTTCTTCTTCTT
Coffea liberica var. dewevrei clone C13_12_03 microsatellite sequence.
DQ655769.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCGTCTTCTTCTTCTTCTTCATTAA
Coffea racemosa clone C10_12_01 microsatellite sequence.
DQ655770.1:42-65
CCTCTCCTCTCACTTTATCTTCAGTTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCATTAATTTCCT
Coffea salvatrix clone C11_12_01 microsatellite sequence.
DQ655771.1:42-65
CCTCTCCTCTCACTTTATCCTCAGTTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCATTAATTTCCT
Psilanthus bengalensis clone C9_12_03 microsatellite sequence.
DQ655773.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCATTAATTTCCT
Psilanthus wightianus clone C14_12_03 microsatellite sequence.
DQ655774.1:42-65
CCTCTCCTCTCACTTTATCCTCAATTTTAT42CCCAGCAAGAACTCAACCCCATCATCAATTCTTCTTCTTCTTCTTCTTCTTCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCAGCAAGAACTCAACCCCATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCAGCAAGAACTCAACCCCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.750 | 1.741 | search_plus_done; http://172.18.8.135:50400/match?q=CCCAGCAAGAACTCAACCCCATCA&k=0&no_gap=0&offset=0&limit=50
1.885 | 0.135 | search_minus_done; http://172.18.8.135:50400/match?q=TGATGGGGTTGAGTTCTTGCTGGG&k=0&no_gap=0&offset=0&limit=10
1.885 | 0.000 | cgi_end;

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