GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 13:39:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Acomys russatus genome assembly, chromosome: 3.
LR877214.1:49629110-49629130
TGCTACAGTTCCAGGACAGGTTGCTAAGGG49629110CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAAAGGCCC
Acomys kempi genome assembly, chromosome: 5.
OU015359.1:95414559-95414579
TGCTACAGTTCCAGGACAGGTTGCTAGGGG95414559CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAAAGGCCC
Acomys percivali genome assembly, chromosome: 5.
OU015746.1:96520684-96520704
TGCTACAGTTCCAGGACAGGTTGCTAAGGG96520684CCCATTCTTCCTTCTGTTTCCTGACTACTGAGACCAGTTTAGCAACGGCCC
Mobula hypostoma genome assembly, chromosome: 25.
OY992618.1:26301943-26301963
GGCCCATGCCCCATCTCCAGGCTTCTTGGC26301943CCCATTCTTCCTTCTGTTTCCTTACAACAAATATTGGGGTTTCAAATCTAA
Peromyscus eremicus genome assembly, chromosome: 22.
OX460415.1:16339776-16339796
CAGTATTGATTGAGGGCTCTACCAGAAGCA16339776GGAAACAGAAGGAAGAATGGGCTGGTGACTTTCAGGGTTCTGTTTGTAAGA
Peromyscus eremicus genome assembly, chromosome: 22.
OX460487.1:18178682-18178702
CGGTATTGATTGAGGGCTCTACCAGAAGCA18178682GGAAACAGAAGGAAGAATGGGCTGGTGACTTACAGGGTTCTGTTTGTAAGA
Polietes domitor genome assembly, chromosome: 1.
OX377618.1:81651051-81651071
GCCAAGATGTCCAACTAATGGAACCCACAA81651051GGAAACAGAAGGAAGAATGGGAATCCGAAGCAAGGATGGCAGACATGATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCATTCTTCCTTCTGTTTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCATTCTTCCTTCTGTTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CCCATTCTTCCTTCTGTTTCC&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAACAGAAGGAAGAATGGG&k=0&no_gap=0&offset=0&limit=46
0.135 | 0.002 | cgi_end;

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