GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 03:05:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Larus fuscus genome assembly, chromosome: 3.
OZ010755.1:39423692-39423711
CGCTCCCATCCTTCAAGCAATACTCTTCTG39423692CCCATTGTGTTCAGCACATCCTAACTTTTTCAATAGCTGGAGAGTTTAAT
Sequence 74901 from patent US 9029636.
HK983964.1:2448-2467
AAGTTCAATGTCTTTGACAGACATTTCAAC2448CCCATTGTGTTCAGCACATCAAATGGGAAGCTGTAAAATGGGTACTAATC
Sequence 2903 from patent US 10750711.
MV608014.1:2253-2272
AAGTTCAATGTCTTTGACAGACATTTCAAC2253CCCATTGTGTTCAGCACATCAAATGGGAAGCTGTAAAATGGGTACTAATC
Sequence 2903 from patent US 11819027.
OT846050.1:2253-2272
AAGTTCAATGTCTTTGACAGACATTTCAAC2253CCCATTGTGTTCAGCACATCAAATGGGAAGCTGTAAAATGGGTACTAATC
Glycine max cultivar Williams 82 chromosome 16.
CP126441.1:7680090-7680109
AAGTTCAATGTCTTTGACAGACATTTCAAC7680090CCCATTGTGTTCAGCACATCAAATGGGAAGCTGTAAAATGGGTACTAATC
Chroicocephalus ridibundus genome assembly, chromosome: 3.
OZ001735.1:90408714-90408733
GTTAAACTCTCCAGCTATTGAAAAAGTTAG90408714GATGTGCTGAACACAATGGGCAGAAGAGTATTGCTTGAAGGATGGGAGCG
PL030007B20F09 cDNA from sexually mature hermaphodites Schmidtea mediterranea cDNA 5', mRNA sequence.
DN291602.1:220-239
CTTACTGGTCTGGAGACGAGCAATAAGTAC220GATGTGCTGAACACAATGGGCCAGCCAATATTCAAAGCAATAGAAATAAA
PL03020A1F05 cDNA from sexually mature hermaphodites Schmidtea mediterranea cDNA 5', mRNA sequence.
DN295524.1:215-234
CTTACTGGTCTGGAGACGAGCAATAAGTAC215GATGTGCTGAACACAATGGGCCAGCCAATATTCAAAGCAATAGAAATAAA
PL04014B1B05 cDNA from sexually mature hermaphodites Schmidtea mediterranea cDNA 5', mRNA sequence.
DN298963.1:245-264
CTTACTGGTCTGGAGACGAGCAATAAGTAC245GATGTGCTGAACACAATGGGCCAGCCAATATTCAAAGCAATAGAAATAAA
Pollicipes pollicipes EST, 5'-end sequence, clone dmp030cmP0004O12.
FN243563.1:38-57
GGGCACGGACCTGCCGTCGGTGACACTGCC38GATGTGCTGAACACAATGGGTTGAGGTTCGCAACAGTCCGACGGAGAGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCATTGTGTTCAGCACATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCATTGTGTTCAGCACATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.268 | 0.259 | search_plus_done; http://172.18.8.135:50400/match?q=CCCATTGTGTTCAGCACATC&k=0&no_gap=0&offset=0&limit=50
0.497 | 0.229 | search_minus_done; http://172.18.8.135:50400/match?q=GATGTGCTGAACACAATGGG&k=0&no_gap=0&offset=0&limit=45
0.501 | 0.004 | cgi_end;

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