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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-16 15:18:17, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Ovis canadensis canadensis isolate 43U chromosome 8 sequence.
CP011893.1:80065474-80065493
TGCAGTCATAGTTTAATTACAAGTTAGTGG80065474CCCATTTTCCCACTTAACACTGTTATCCTAAGTTGTCAGCGCTGCTCACA
Bos mutus isolate yakQH1 chromosome 9.
CP027077.1:93369050-93369069
TGCAGTCATAGTTTCATTACAAGTTAGTGG93369050CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGCGCTGTTCAGT
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP162217.1:90060242-90060261
TGCAGTCATAGTTTAATTACAAGTTAGTGG90060242CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Ovis aries breed hu sheep isolate hu3095 chromosome 8.
CP162247.1:87681136-87681155
TGCAGTCATAGTTTAATTACAAGTTAGTGG87681136CCCATTTTCCCACTTAACACTGTTATCCTAAGTTGTCAGCGCTGCTCACA
Ovis aries breed Hu sheep isolate HU3095-Father chromosome 8.
CP162280.1:85488989-85489008
TGCAGTCATAGTTTAATTACAAGTTAGTGG85488989CCCATTTTCCCACTTAACACTGTTATCCTAAGTTGTCAGCGCTGCTCACA
Ovis aries breed Hu sheep isolate HU3095-Mother chromosome 8.
CP162344.1:82778771-82778790
TGCAGTCATAGTTTAATTACAAGTTAGTGG82778771CCCATTTTCCCACTTAACACTGTTATCCTAAGTTGTCAGCGCTGCTCACA
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP162681.1:86314979-86314998
TGCAGTCATAGTTTAATTACAAGTTAGTGG86314979CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP162711.1:87688256-87688275
TGCAGTCATAGTTTAATTACAAGTTAGTGG87688256CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP168336.1:86314979-86314998
TGCAGTCATAGTTTAATTACAAGTTAGTGG86314979CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP168366.1:87688256-87688275
TGCAGTCATAGTTTAATTACAAGTTAGTGG87688256CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Capra hircus breed Inner Mongolia cashmere goat chromosome 9.
CP168619.1:90060242-90060261
TGCAGTCATAGTTTAATTACAAGTTAGTGG90060242CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGCTCAGT
Bos taurus genome assembly, chromosome: 9.
LR962767.1:93993974-93993993
TGCAGTCATAGTTTCATTACAAGTTAGTGG93993974CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGTTCAGT
Bos taurus genome assembly, chromosome: 9.
LR962892.1:93860357-93860376
TGCAGTCATAGTTTCATTACAAGTTAGTGG93860357CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGTTCAGT
Bos gaurus x Bos taurus genome assembly, chromosome: 9.
OX258963.1:98297015-98297034
TGCAGTCATAGTTTCATTACAAGTTAGTGG98297015CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGTTCAGT
Bos taurus strain mammals genome assembly, chromosome: 9.
OX344698.1:99646799-99646818
TGCAGTCATAGTTTCATTACAAGTTAGTGG99646799CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGTTCAGT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 34.
OX460345.1:32534684-32534703
TGCAGTCATAGTTTAATTACAAGTTAGTGG32534684CCCATTTTCCCACTTAACACTATCATCCTAAGTCGTCAGTGCTGTTTACA
Rangifer tarandus platyrhyncus genome assembly, chromosome: 32.
OX596116.1:35399410-35399429
TGCAGTCATAGTTTAATTACAAGTTAGTGG35399410CCCATTTTCCCACTTAACACTATCATCCTAAGTCGTCAGTGCTGTTTACA
Bos taurus genome assembly, chromosome: Bta09.
OY997237.1:97516778-97516797
TGCAGTCATAGTTTCATTACAAGTTAGTGG97516778CCCATTTTCCCACTTAACACTGTTATCCTAAGTCGTCAGTGCTGTTCAGT
TSA: Cannabis sativa PK17530.1_1.CasaPuKu mRNA sequence.
JP449789.1:204-223
TTTTGAAGAATCTTCTAATAAAAACCCCAC204CCCATTTTCCCACTTAACACTTTTCTTCTTTCTTTCTTCTTCTTCTTCTT
GC_Bc023E10.F GC_Bc Glycine canescens genomic 5', genomic survey sequence.
JS016862.1:842-861
TGATCTGATTTCATTTAGTGGTTGTCGTCT842CCCATTTTCCCACTTAACACAGGGACAAAAATAATTTTCCATGCTCCGGA
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-32I8.
CU570845.2:136249-136268
TGTAATCATACTTTAATTATAGTTTAGTGG136249CCCATTTTCCCACTTAACACGTATCCTAAGTCGCCAGCACTGTTAACAGT
Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158649.1:2054862-2054881
TTTTGAAGAATCTTCTAATAAAAACCCCAC2054862CCCATTTTCCCACTTAACACTTTTCTTCTTTCTTCTTCTTCTTCTTCTGA
Dolomedes plantarius genome assembly, chromosome: 8.
OU015497.1:114076827-114076846
ACTAAATGAACCTCACCATAAATTATTTTG114076827CCCATTTTCCCACTTAACACATTTTCACATGTCTCAATTCATCTGAGTGG
Anania hortulata genome assembly, chromosome: 1.
OY756388.1:20296477-20296496
GAAAGCAATTACACTCACATAGTGATAATG20296477CCCATTTTCCCACTTAACACATGCTTACTGAACGTTAACAACACTATTGT
Rugalucina vietnamica genome assembly, chromosome: 8.
OZ024876.1:42852032-42852051
TTACACTAGTCACCCCCCCCCCCCCCCCCC42852032CCCATTTTCCCACTTAACACCACTCTCTATGCTTTGGTATATTTTTGTCA
Stylophora pistillata genome assembly, chromosome: 4.
OZ123628.1:27937377-27937396
TTTTTTCCTTCCCCTCCCTCTCCCCCATTG27937377CCCATTTTCCCACTTAACACCTACTCCCTCTGCAAATATTTCCTCGCCTC
Stylophora pistillata genome assembly, chromosome: 10.
OZ123634.1:9935478-9935497
AAATTTCCTTCCCCTCCCTCTCCCCCGTTG9935478CCCATTTTCCCACTTAACACCTACTCCCTCGGCAAATATTTCCTCGCCCA
Sus scrofa scrofa breed NS chromosome 1.
CP071552.1:10363208-10363227
ACTGTTAACAGTGCTGGCGACTTAGGATAC10363208GTGTTAAGTGGGAAAATGGGCCACTAAACTATAATTAAAGTATGATTACA
Capra hircus breed Inner Mongolia Cashmere goat isolate AEBS_806099 chromosome 9.
CP155490.1:10730708-10730727
ACTGAGCAGCACTGACGACTTAGGATAACA10730708GTGTTAAGTGGGAAAATGGGCCACTAACTTGTAATTAAACTATGACTGCA
Sus scrofa genome assembly, chromosome: 1.
OY997208.1:10321308-10321327
ACTGTTAACAGTGCTGGCGACTTAGGATAC10321308GTGTTAAGTGGGAAAATGGGCCACTAAACTATAATTAAAGTATGATTACA
Muntiacus reevesi genome assembly, chromosome: 3.
OZ005626.1:166322273-166322292
ACTGTAAACAGCACTGACGACTTAGGATAA166322273GTGTTAAGTGGGAAAATGGGCCACTAACTTGTAATTAAACTATGACTGCA
Rupicapra rupicapra genome assembly, chromosome: 11.
OZ022281.1:10683868-10683887
TGTGAGCAGCACTGACAACTTACGATAACA10683868GTGTTAAGTGGGAAAATGGGCCACTAACTTGTAATTAAACTATGACTGCA
GD_TBa061C22.R GD_TBa Glycine dolichocarpa genomic 3', genomic survey sequence.
HN360629.1:567-586
TGTATTGGTGGATAAGTGTGGAAAGGGTTT567GTGTTAAGTGGGAAAATGGGATGGAATTTGATGAACACATTGTGAGTTGT
GD_TBa061G22.R GD_TBa Glycine dolichocarpa genomic 3', genomic survey sequence.
HN385357.1:568-587
TGTATTGGTGGAGAGGTGTGGAAAGGGCTT568GTGTTAAGTGGGAAAATGGGATGGAATTTGATGAAAACATTGTGATTTGT
Bos taurus clone CH240-216C22, WORKING DRAFT SEQUENCE, 6 unordered pieces.
AC170135.3:125673-125692
ACTGAACAGCACTGACGACTTAGGATAACA125673GTGTTAAGTGGGAAAATGGGCCACTAACTTGTAATGAAACTATGACTGCA
Bos taurus clone CH240-103E4, WORKING DRAFT SEQUENCE, 5 unordered pieces.
AC183136.2:54183-54202
ACTGAACAGCACTGACGACTTAGGATAACA54183GTGTTAAGTGGGAAAATGGGCCACTAACTTGTAATGAAACTATGACTGCA
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-125F5.
CU915538.2:75124-75143
NNNNNNNNNNGTGCTGGCGACTTAGGATAC75124GTGTTAAGTGGGAAAATGGGCCACTAAACTATAATTAAAGTATGATTACA
Cannabis sativa cultivar ERBxHO40_23 chromosome 8.
CP158659.1:53717960-53717979
TCAGAAGAAGAAGAAGAAGAAAGAAGAAAA53717960GTGTTAAGTGGGAAAATGGGATGGGGTTTTTATTAGAAGATTCTTCAAAA
Leptopterna dolabrata genome assembly, chromosome: 13.
OX940987.1:18302260-18302279
CTCGGCAGCCCGATCGGATTGCACCCAGGG18302260GTGTTAAGTGGGAAAATGGGTGTAAAAATAGGGGTTTTCGAGGTTTTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCATTTTCCCACTTAACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCATTTTCCCACTTAACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.175 | 0.167 | search_plus_done; http://172.18.8.135:50800/match?q=CCCATTTTCCCACTTAACAC&k=0&no_gap=0&offset=0&limit=50
0.323 | 0.147 | search_minus_done; http://172.18.8.135:50800/match?q=GTGTTAAGTGGGAAAATGGG&k=0&no_gap=0&offset=0&limit=23
0.331 | 0.008 | cgi_end;

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