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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:42:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Haliaeetus albicilla genome assembly, chromosome: 1.
OX381636.1:83326352-83326371
TAACTTCAAGGCTAGAATGGGCTACTCAGC83326352CCCCATCCTTTCAACTTGTGACTATTTCCAAGGATGCAGGCTCCGCCACC
Haliaeetus albicilla genome assembly, chromosome: 1.
OX381636.1:83387566-83387585
TAACTTCAAGGCTAGAATGGGCTACTCAGC83387566CCCCATCCTTTCAACTTGTGACTATTTCCAAGGATGCAGGCTCCGCCACC
Citrus sinensis genome assembly, chromosome: 4.
OY754321.1:28977011-28977030
AAAACGAACACAATCTGAAACCCTAAAACT28977011CCCCATCCTTTCAACTTGTGATAAAACAAAAAGGTACCAACTTAAACAAC
Linnaemya vulpina genome assembly, chromosome: 2.
OY776277.1:97428156-97428175
CATCGCATATGCACATTTCTGTTAGGCCAA97428156CCCCATCCTTTCAACTTGTGAAAGATAAAAGTTACCTCAATATATAAGCA
Sequence 89569 from Patent EP2761003.
JC703788.1:473-492
GTTGTTTAAGTTGGTACCTTTTTGTTTTAT473CACAAGTTGAAAGGATGGGGAGTTTTAGGGTTTCAGATTGTGTTCGTTTT
UCRCS04_2_029D10_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_029_T7_D10, mRNA sequence.
CV887146.1:624-643
GTTGTTTAAGTTGGTACCTTTTTGTTTTAT624CACAAGTTGAAAGGATGGGGAGTTTTAGGGTTTCAGATTGTGTTCGTTTT
IC0AAA35CF11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY274062.1:582-601
GTTGTTTAAGTTGGTACCTTTTTGTTTTAT582CACAAGTTGAAAGGATGGGGAGTTTTAGGGTTTCAGATTGTGTTCGTTTT
IC0AAA35CF11RM2 IVIA1 Citrus clementina cDNA clone IC0AAA35CF11, mRNA sequence.
FC886089.1:582-601
GTTGTTTAAGTTGGTACCTTTTTGTTTTAT582CACAAGTTGAAAGGATGGGGAGTTTTAGGGTTTCAGATTGTGTTCGTTTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCATCCTTTCAACTTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCATCCTTTCAACTTGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.198 | 0.189 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCATCCTTTCAACTTGTG&k=0&no_gap=0&offset=0&limit=50
0.441 | 0.244 | search_minus_done; http://172.18.8.135:50400/match?q=CACAAGTTGAAAGGATGGGG&k=0&no_gap=0&offset=0&limit=46
0.444 | 0.003 | cgi_end;

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