GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 02:29:38, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:5511363-5511382
GGTAGCTGAAGATGAATCTGCAGAGTCATA5511363CCCCATTACATGAATGAATCAATGAATGATGATGCTCAGCTGGATTCCAT
Apamea crenata genome assembly, chromosome: Z.
OX451351.1:24253469-24253488
TTGGGCCTGGTTATTGGCAATTTGCTGGCC24253469CCCCATTACATGAATGAATCTAAAACATACCTGGCGATGTATTGCTTCTA
Cervus elaphus genome assembly, chromosome: 33.
OU343110.1:21021957-21021976
GAAGGTCAAATATCAGTTAAGATATATTAT21021957GATTCATTCATGTAATGGGGTAAATATACACACTTATTTTAAAAATATGA
Lotus japonicus cDNA, clone: LjFL3-028-BD08, 5'-end sequence.
FS327563.1:194-213
ATGGAATCCAGCTGAGCATCATCATTCATT194GATTCATTCATGTAATGGGGTATGACTCTGCAGATTCATCTTCAGCTACC
Lotus japonicus cDNA, clone: LjFL3-036-DC03, 5'-end sequence.
FS330334.1:271-290
ATGGAATCCAGCTGAGCATCATCATTCATT271GATTCATTCATGTAATGGGGTATGACTCTGCAGATTCATCTTCAGCTACC
LJMAY34TF JCVI-LJ2 Lotus japonicus cDNA 5', mRNA sequence.
GO020212.1:111-130
ATGGAATCCAGCTGAGCATCATCATTCATT111GATTCATTCATGTAATGGGGTATGACTCTGCAGATTCATCTTCAGCTACC
Lotus japonicus cDNA, clone: LjFL3-036-DC03, HTC.
AK339035.1:271-290
ATGGAATCCAGCTGAGCATCATCATTCATT271GATTCATTCATGTAATGGGGTATGACTCTGCAGATTCATCTTCAGCTACC
Lotus japonicus genomic DNA, chromosome 3, clone: LjB25F18, BM1487.
AP008109.2:34247-34266
ATGGAATCCAGCTGAGCATCATCATTCATT34247GATTCATTCATGTAATGGGGTATGACTCTGCAGATTCATCTTCAGCTACC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCCATTACATGAATGAATC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCATTACATGAATGAATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCATTACATGAATGAATC&k=0&no_gap=0&offset=0&limit=50
0.422 | 0.326 | search_minus_done; http://172.18.8.135:50400/match?q=GATTCATTCATGTAATGGGG&k=0&no_gap=0&offset=0&limit=48
0.426 | 0.004 | cgi_end;

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