GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-17 13:40:53, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-40013 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w9g20 5', mRNA sequence.
DV695218.1:56-75
AATAACTATAGTCTAACAGCAATCCCCATT56CCCCCACCCACTTCTCTTTGCCATTTCTAAATTCTTCTATTAAGTACTAC
CA00-XX-EA1-056-F06-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-056-F06-EC, mRNA sequence.
GW446042.1:73-92
AAAAACTATAGCTCAACAGCAATCCCCATT73CCCCCACCCACTTCTCTTTGCCATTTCTAAATTCTTCTATTAAGTACTAC
TSA: Coleochaete sp. CFD corb_UMD_Coleochaete_c5666_c_s mRNA sequence.
JO235758.1:1272-1291
TTTAAAGTAGGACACGTCTCCTTGCACCCT1272CCCCCACCCACTTCTCTTTGCATCGTGAAAATGGTATGATATGTTATTAT
Vitis vinifera x Vitis labrusca cultivar Shine Muscat chromosome 15.
CP161607.1:9394744-9394763
TCCGATAGGCCCACAGGACGCTGGGTAACT9394744CCCCCACCCACTTCTCTTTGGCTTGCTCAAGCCTTTTCTTTAAGGCAGTG
Vitis vinifera cultivar Muscat Hamburg chromosome 15.
CP161664.1:9501146-9501165
TCCGATAGGCCCACAGGACGCTGGGTAACT9501146CCCCCACCCACTTCTCTTTGGCTTGCTCAAGCCTTTTCTTTAAGGCAGTG
Vitis vinifera genome assembly, chromosome: 15.
OZ210977.1:14377862-14377881
TCCGATAAGCCCACAGGACGCTGGGTAACT14377862CCCCCACCCACTTCTCTTTGGCTTGCTCAAGCCTTTTCTTTAAGGCAGTG
Acholoe squamosa genome assembly, chromosome: 13.
OX439047.1:11682518-11682537
AATTCATGTTTCCCATTTTTTTTTATCTGT11682518CCCCCACCCACTTCTCTTTGGCACAAATCAATATCAACAACAGATGACTA
Agonopterix alstromeriana genome assembly, chromosome: 14.
OZ004675.1:17395081-17395100
AAGGTTACCTCACCACTCGGCTACTTGTAT17395081CCCCCACCCACTTCTCTTTGTTGGCTTTTTAGTGAAATTTGTTCAGTTTT
Lissotriton helveticus genome assembly, chromosome: 1_1.
OZ180042.1:1634638563-1634638582
TCCACTCCGTATCATCCATCTCACCCAGTT1634638563CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGCAGGTTGTTA
Lissotriton helveticus genome assembly, chromosome: 5_1.
OZ180050.1:1782420233-1782420252
TCCACTCCGTATCATCCATCTCACCCAGTT1782420233CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGCAGGTTGTTA
Lissotriton helveticus genome assembly, chromosome: 7.
OZ180053.1:1163512899-1163512918
ACTCCATATTGCGGGTGGAATGAGGATGTG1163512899CCCCCACCCACTTCTCTTTGGTTTGCCTTTCTTGATGAGTGAAGTGGCTG
Lissotriton helveticus genome assembly, chromosome: 12.
OZ180058.1:614099210-614099229
TCCACTCCGTATCATCCATCTCACCCATTT614099210CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGCAGGTTGTTA
Lissotriton vulgaris genome assembly, chromosome: 2_1.
OZ183351.1:159713742-159713761
TCCACTCCGTATCATCCATCTCACCCAATT159713742CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGTTGGTTGTTA
Lissotriton vulgaris genome assembly, chromosome: 6.
OZ183358.1:685713902-685713921
TCCATTCTGTATCATCCATCTCACCCAGTT685713902CCCCCACCCACTTCTCTTTGAGTTTCTGTGTTGGGTCTGGCAGGTTATTA
Lissotriton vulgaris genome assembly, chromosome: 6.
OZ183358.1:979386167-979386186
TCCACTCTGTATCATCCATCTCACCCAGTT979386167CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGCAGGTTGTTA
Lissotriton vulgaris genome assembly, chromosome: 6.
OZ183358.1:1532465556-1532465575
TCCACTCCATATCATCCATCTCACCAAATT1532465556CCCCCACCCACTTCTCTTTGAGTTTCTGTGTGGGGTCTGGCAGGTTGTTA
Lissotriton vulgaris genome assembly, chromosome: 7.
OZ183359.1:336173268-336173287
TCCATTCTGTATCATCCATCTCACCCAGTT336173268CCCCCACCCACTTCTCTTTGAGTTTCTGTGTTGGGTCTGGCAGGTTATTA
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:534172957-534172976
TCCATTCTGTATCATCCATCTCACCCAGTT534172957CCCCCACCCACTTCTCTTTGAGTTTCTGTGTTGGGTCTGGCAGGTTATTA
Plecotus auritus genome assembly, chromosome: 12.
OY734034.1:40687645-40687664
GGAGCTGCTCTTTCTGTTCTTTATTTTTGC40687645CAAAGAGAAGTGGGTGGGGGTACATTTAGGCATTCAGAGTGACCGTTCCA
Sambucus nigra genome assembly, chromosome: 9.
OX422215.1:113659783-113659802
AATTCGGTGAGGGAAGGGGTTAGGGTTCTT113659783CAAAGAGAAGTGGGTGGGGGCAGGGAAGGGGAGAGAGAGGTTAATGGATT
Adalia decempunctata genome assembly, chromosome: 1.
OX637695.1:37821408-37821427
GAACGAAAAAAAGAACAAACATGACGAAAA37821408CAAAGAGAAGTGGGTGGGGGGATCTGAAACATCAAATATAATAAAATTCC
Trachurus japonicus A0001 DNA, chromosome 22, sequence.
AP029641.1:8088910-8088929
ACTTAAGAGAAAATTTATAAGGGGATTGAC8088910CAAAGAGAAGTGGGTGGGGGACGATTATCTCTGTGCCGACAAAGATCTTT
Thalassophryne amazonica genome assembly, chromosome: 3.
LR722968.1:86378065-86378084
CAAAACAAATTTAATTTTCTTTGGATGAAC86378065CAAAGAGAAGTGGGTGGGGGGGGGGTGCATCTCTCATATCATTCCTCCCT
Scyliorhinus canicula genome assembly, chromosome: 7.
LR744036.1:12704527-12704546
TAACCGCTGTGCTACCGTACTGAATACGGG12704527CAAAGAGAAGTGGGTGGGGGTATGGGTTTGCATGAGTTGACATTAAGTTG
Lissotriton helveticus genome assembly, chromosome: 7.
OZ180053.1:423169662-423169681
TAACAACCTGCCAGACCCCACACAGAAACT423169662CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACGGAGTGGA
Lissotriton vulgaris genome assembly, chromosome: 1_1.
OZ183349.1:1874061293-1874061312
TAACAACCTGCCAGACCCCACACAGAAACT1874061293CAAAGAGAAGTGGGTGGGGGAATTGGGTGAGATGGATGATATGGAGTGGA
Lissotriton vulgaris genome assembly, chromosome: 1_1.
OZ183349.1:1961926486-1961926505
TAATAACCTGCCAGACCCAACACAGAAACT1961926486CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAATGGA
Lissotriton vulgaris genome assembly, chromosome: 2_1.
OZ183351.1:207551834-207551853
TAATAACCTGCCAGACCCAACACAGAAACT207551834CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAGTGGA
Lissotriton vulgaris genome assembly, chromosome: 2_1.
OZ183351.1:263382422-263382441
TAATAACCTGCCAGACCCAACACAGAAACT263382422CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAATGGA
Lissotriton vulgaris genome assembly, chromosome: 4_1.
OZ183355.1:166115837-166115856
AAATAACCTGCCAGACCCCACACAGAAACT166115837CAAAGAGAAGTGGGTGGGGGAACTAGGTGAGATGGATGATACAGAGTGGA
Lissotriton vulgaris genome assembly, chromosome: 4_1.
OZ183355.1:1131049614-1131049633
TAATAACCTGCCAGACCCAACACAGAAACT1131049614CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAATGGA
Lissotriton vulgaris genome assembly, chromosome: 7.
OZ183359.1:697730845-697730864
TAATAACCTGCCAGACCCAACACAGAAACT697730845CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAATGGA
Lissotriton vulgaris genome assembly, chromosome: 7.
OZ183359.1:715306811-715306830
CAGCCTCTTCACTCATCAAGAAAGGCAAAT715306811CAAAGAGAAGTGGGTGGGGGCACATCCTCATTCCGCCCACATATGGAGTG
Lissotriton vulgaris genome assembly, chromosome: 9.
OZ183361.1:765822190-765822209
TAATAACCTGCCAGACCCAACACAGAAACT765822190CAAAGAGAAGTGGGTGGGGGAACTGGGTGAGATGGATGATACAGAATGGA
Lissotriton vulgaris genome assembly, chromosome: 11.
OZ183363.1:525982693-525982712
TAACAACCTGCCAGACCCCACACAGAAACT525982693CAAAGAGAAGTGGGTGGGGGAATTGGGTGAGATGGATGATACGGAGTGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCCACCCACTTCTCTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCACCCACTTCTCTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.234 | 0.224 | search_plus_done; http://172.18.8.135:50800/match?q=CCCCCACCCACTTCTCTTTG&k=0&no_gap=0&offset=0&limit=50
0.289 | 0.055 | search_minus_done; http://172.18.8.135:50800/match?q=CAAAGAGAAGTGGGTGGGGG&k=0&no_gap=0&offset=0&limit=32
0.300 | 0.011 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).